Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0407 ATGGTGGGATTGCAATTTGGGTTGGCAGGAACATACATCTTCGTCATGGATAGCCTCAACCATGGAATGAATCGTTTTATCTTCATTGTCTACCGCAATGCCTTCGCTGCTTTTGCCCTCGCTCCTTTTGCACTCTTTTTTGAGAGGAAAATTAGGCCCAAGATGACACTCTCTGTGTTCTTGCAGATAATGGCGCTAGCATTTCTGGAGCCAGTGGTTGACCAAGGTATATCCTTTCTGGGGATGCAATACAGTTCGGCCGCATATGCATCTGCTATTATGAATGCTGTGCCGTCTGTGACTTTTGTGCTTGCAGCAATTCTTCGGGTGGAGCGAGTGAAAATAAAGGAGGCAGGAAGTCAAGCCAAAGTGATTGGAACCATCGTAACCTTTGGAGGCGCTTTGTTTATGACACTTTACAAAGGTCCTCTAATTCACCTCTTTTCTTCTCATCACCAAcaacataatataaatattcccACTCACAAACACTACCTCGCCGGCACCATTCTCTTACTCCTCGGCTGTCTCGCTTGGTCCTCTTTCTACATTCTCCAGAGCATAACCGTGAAACGATACCCCGCCGAACTATCACTGGCCTGCTTCATATGCTTCATGGGTGCTCTACAAACTACCGTGGTGGCGCTTCTACTTGATCATCACCCTCGCGCTTGGGCTCTAGGCTGGGACCACAGGCTCTTCGCTCCTCTCTACACGGGAGTAGTTAGTTCGGGAATTACGTATTATGTGCAAGGCTGGGTGATGAAAAGAAGAGGCCCAGTCTTTGTCACGGCCTTTAGTCCTCTTTGCATGATCATTGTCGCCGTTTTGGGCTCCCTTTTGTTATCTGAACATCTCCATCTCGGAAGGAAAGTTAGGCCCAAGATGACATTTCGGATTTTTTCTGAGATTATGTTGCTGGCTTTTGTTGAGATAATACTTGACCAGTGCTTCACACTCTTGGGCATGAAATTAACGTCCGCATCATTTACATCTGCCGTCATGAACTCTGTTCCCTCCATTACCTTTCTCCTCGCCGTCATTCTTCGAATGGAGAGGATGAAGATAAAGGAGATGACGTGCCAAGCGAAAGTGACAGGGACAGTAGTAACACTGGGAGGAGCTTTGCTAATGGCAATGTACAAAGGACCCATTCTTCATTTGATGGGCTCATCAAACACACATACAGCTCAGCCTCAGAATGTGAGCGACCCCACTGGCTCACAATGGCTTATGGGTTCTTTTTTCGTCCTCATTGCTTGTTCTGCCTTCGCTGCATTTTACATTTTGCAGGCGATAACATTGAAAAAGTACCAAGCAGAGATGTCGCTGGCCACACTGATATGCTTAGTGGGGTCAGTACAGAGCGTGGGAGTGGCAGCTTACATGGAGCGTCACAATCCTCATGCTTGGGCTCTTGGGTGGGATTTAAGTGTAATTGGAGGCCTGGTGGTGGCTGTTGGGCTGTATCTGGTTGTTTGGGGAAAATACACTGAAAACAAGGACGCGAAGAAGGCAGTATCAAAGGACACATCCCAATCCCAATCCCAATCCCTTAAGCAGCAACTTCCAGTAACAATTAGTAATAATGATGAAGATGAGCCACCTCGTTTGATCATAGTtgctcataataataataataataatagcattGTGGATTCCAGATTATCCACTACTACTTAA 1683 0.4545 MVGLQFGLAGTYIFVMDSLNHGMNRFIFIVYRNAFAAFALAPFALFFERKIRPKMTLSVFLQIMALAFLEPVVDQGISFLGMQYSSAAYASAIMNAVPSVTFVLAAILRVERVKIKEAGSQAKVIGTIVTFGGALFMTLYKGPLIHLFSSHHQQHNINIPTHKHYLAGTILLLLGCLAWSSFYILQSITVKRYPAELSLACFICFMGALQTTVVALLLDHHPRAWALGWDHRLFAPLYTGVVSSGITYYVQGWVMKRRGPVFVTAFSPLCMIIVAVLGSLLLSEHLHLGRKVRPKMTFRIFSEIMLLAFVEIILDQCFTLLGMKLTSASFTSAVMNSVPSITFLLAVILRMERMKIKEMTCQAKVTGTVVTLGGALLMAMYKGPILHLMGSSNTHTAQPQNVSDPTGSQWLMGSFFVLIACSAFAAFYILQAITLKKYQAEMSLATLICLVGSVQSVGVAAYMERHNPHAWALGWDLSVIGGLVVAVGLYLVVWGKYTENKDAKKAVSKDTSQSQSQSLKQQLPVTISNNDEDEPPRLIIVAHNNNNNNSIVDSRLSTTT 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0407 560 MobiDBLite consensus disorder prediction 509 529 - -
Sto5g0407 560 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 290 - -
Sto5g0407 560 Pfam EamA-like transporter family 9 138 IPR000620 GO:0016020|GO:0016021
Sto5g0407 560 Pfam EamA-like transporter family 167 288 IPR000620 GO:0016020|GO:0016021
Sto5g0407 560 PANTHER WAT1-RELATED PROTEIN 1 289 IPR030184 GO:0016021|GO:0022857
Sto5g0407 560 PANTHER WAT1-RELATED PROTEIN 478 521 IPR030184 GO:0016021|GO:0022857
Sto5g0407 560 PANTHER WAT1-RELATED PROTEIN 289 476 IPR030184 GO:0016021|GO:0022857
Sto5g0407 560 SUPERFAMILY Multidrug resistance efflux transporter EmrE 31 141 - -
Sto5g0407 560 MobiDBLite consensus disorder prediction 506 529 - -
Sto5g0407 560 PANTHER WAT1-RELATED PROTEIN 478 521 - -
Sto5g0407 560 PANTHER WAT1-RELATED PROTEIN 289 476 - -
Sto5g0407 560 PANTHER WAT1-RELATED PROTEIN 1 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0407 Sto-Chr5 2542985 2552050 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0407 290 493 Nodulin-like Gene Family AT4G08290 48.095 1.72e-60 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0407 - - gmx:100777641 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0407 5 2542985 2552050 Sto5g0407 5 2542985 2552050 ECH