Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0389 ATGGCGGATTCAAGGGTCGAGACTATTTCCAGGTTAGCCCAATGGAAAATTGACAACTTCGGACCTTGCTCCTACAAAAAATCTGACCCTTTCAAGCTCGGAATCTGGAATTGGTACTTATCTATAGAGAGGAATAGGTACCTCTACATACATCTATTTCCGGAGCCTTCACGGATTTCTAAGGAACACCCACCAATCGCTCGATTTATTCTCCGTGTGTCTAATACCGGCTCTTCCCGAAGATTTTACATTTCTCCTGTTCATGAAAGAGTGCTTAGGACTTGTGATGATTTTGTCTGGCCTGTTGATACTACATTTGTTGGTCGCCTAATTATCGATGTTGAATTTCTTGACCTGAAGATCTGTTCTCAGAATGGTGGAGAAGCGTGTTCTATATGGCCGACTGATGGAAAACTTCAATCTGTTGCTACTCAAAGCACCCTCCAATGCCTCTCTCGCATGCTTGACGAAGGAATACATGCTGATCTCACCATTAATACTGCAGATGGTACATTGAGAGCTCACAAGGCAGTTTTGTCTGCAAGTTCTCCTGTGTTTCAGAGCATGTTTCATCACAACCTGAAGGAAAAAGAGTCATCTACAATCCACATAGAAGACATGTCACTAGAAGCTTGCATGGCCCTTCTAAGTTATTTGTATGGCACAATAAAACAAGAAGATTTCTGGAAGCACCGCCTTGCATTGCTTGGAGCAGCCAATAAATATGACATTGCTGCTCTTAAGGATGCCTGCGAAGAAAGCCTTCTGGAAGATCTTAACTCAGCAAATGTACTTGATAGGTTAAACGAGGCTTGGCTTTATCAGCTGCACAAGTTGAAGAAAGGATGCTTGACGTTCTTATTTGATTTTGGTAAGATATACGATGTAAGAGaagaaataaataacttcttcAGGCATGCAGATAGGGAACTGATGCTGGAGATGTTTCAGGAGGTGCTTACAATTTGGAAACCGTTATAA 981 0.4149 MADSRVETISRLAQWKIDNFGPCSYKKSDPFKLGIWNWYLSIERNRYLYIHLFPEPSRISKEHPPIARFILRVSNTGSSRRFYISPVHERVLRTCDDFVWPVDTTFVGRLIIDVEFLDLKICSQNGGEACSIWPTDGKLQSVATQSTLQCLSRMLDEGIHADLTINTADGTLRAHKAVLSASSPVFQSMFHHNLKEKESSTIHIEDMSLEACMALLSYLYGTIKQEDFWKHRLALLGAANKYDIAALKDACEESLLEDLNSANVLDRLNEAWLYQLHKLKKGCLTFLFDFGKIYDVREEINNFFRHADRELMLEMFQEVLTIWKPL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0389 326 Gene3D Potassium Channel Kv1.1; Chain A 135 288 IPR011333 -
Sto5g0389 326 SMART BTB_4 161 259 IPR000210 GO:0005515
Sto5g0389 326 SUPERFAMILY POZ domain 144 257 IPR011333 -
Sto5g0389 326 ProSiteProfiles BTB domain profile. 161 220 IPR000210 GO:0005515
Sto5g0389 326 Pfam BTB/POZ domain 153 257 IPR000210 GO:0005515
Sto5g0389 326 CDD BTB_POZ_ZBTB_KLHL-like 160 242 - -
Sto5g0389 326 PANTHER OS08G0103600 PROTEIN 1 325 - -
Sto5g0389 326 PANTHER OS08G0495500 PROTEIN-RELATED 1 325 IPR044714 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0389 Sto-Chr5 2432738 2435007 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Sto5g0389 BTB 1.6e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0389 K10523 - rcu:8278000 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0389 5 2432738 2435007 Sto5g0389 5 2432738 2435007 ECH