Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0384 atgaaaatggaGGTGGATAGCACTAAGATGGGAAAGGTAGAGGAGGAAGAGAATGTCCCCCATTTCCATGTCTTGGCTGTTGATGATAGTCTCATCGATAGGAAACTTCTCGAGAAGCTTCTTCAAGTTTCTTCCTGCAAAGTGACGTGTGTGGATTCTGGGGACAAGGCTTTGAAATATCTTGGTCTGCTTGATCCTCACAATGCTTCTTCACTTTCTTCCCCCTCTTCTCCTCATCAACAACAGGGAATGAAAGTGAATTTGATCATGACGGATTACTGCATGCCAGGGATGAGTGGTTATGATTTACTTAAACGAGTCAAGCTGCAGGGATCTTCTTGGAAAGATGTACCAGTTGTTATTATGTCATCAGAGAATGTACCTTCCAGAATCAGCATgtgcctAGAAGAGGGAGCAGAGGAATTTCTACTGAAGCCACTGAAGTTATCAGATTTGAAGAAGCTTCAGCCGTACCTTCTGAAATccgtcaataataataataatagtagtagtAGTTGGGATTGGGAAGGAGAATCTGGTAACAGTAGCGTAGGTACCGACAAGGAGTGTAGCAATAAGAGCATAAACAGCAATTGTATTGCCAAAAGGAAGGCCCTGTCTCCTGAAGGTCAAGACCCAAAATCAAAGGCTTGCCTGTGCTCTAGctaa 669 0.4081 MKMEVDSTKMGKVEEEENVPHFHVLAVDDSLIDRKLLEKLLQVSSCKVTCVDSGDKALKYLGLLDPHNASSLSSPSSPHQQQGMKVNLIMTDYCMPGMSGYDLLKRVKLQGSSWKDVPVVIMSSENVPSRISMCLEEGAEEFLLKPLKLSDLKKLQPYLLKSVNNNNNSSSSWDWEGESGNSSVGTDKECSNKSINSNCIAKRKALSPEGQDPKSKACLCSS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0384 222 CDD REC_typeA_ARR 24 155 - -
Sto5g0384 222 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 12 207 - -
Sto5g0384 222 SUPERFAMILY CheY-like 21 159 IPR011006 -
Sto5g0384 222 SMART REC_2 22 156 IPR001789 GO:0000160
Sto5g0384 222 Pfam Response regulator receiver domain 24 154 IPR001789 GO:0000160
Sto5g0384 222 PANTHER TWO-COMPONENT RESPONSE REGULATOR 12 207 IPR045279 GO:0009736
Sto5g0384 222 MobiDBLite consensus disorder prediction 167 193 - -
Sto5g0384 222 Gene3D - 10 162 - -
Sto5g0384 222 ProSiteProfiles Response regulatory domain profile. 23 160 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0384 Sto-Chr5 2387282 2389429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0384 21 162 Response Regulator Gene Family AT3G57040 63.448 3.45e-63 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto5g0384 Response_reg 1.1e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0384 K14492 - gmx:100801334 239.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0384 5 2387282 2389429 Sto5g0384 5 2387282 2389429 ECH