Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0370 ATGAAAGCTCCCAACATATGTAGCCTCTGCTTTCTACTTGTTTTCTTCAAATTTGTATCCTGTGCAAATGCAACTGCAACTGCTGATGATCAAGATATTGATATTTCCAGTGGCACCAGTATCATCTACTATCCACTTGGCAGACTCTATTTCGCCTTTGATATCTATTCCCTCCCAATACATTCACCCAAACCTTACCACGAAACTAAACTCACTGATGGCCACAACCTCAACTATAACGGCCACTTCCCttctccctcttcttcctccctcctcttctccctcttaCCCAATCAAACCGCCATCAACATCCAATCCGATCAGCCTCCTCTGCAACTCATCTACGTCACCGAAAGAAACGATGGCTTCTCCAACATATACTTCGATGCCGTTTATTCCGACGATGCGAGAAATCCAAGAAGGAGGTCTGCCCTTGAATCCCTCGGAGACAGAATCCAAATACCTCTGTTATCCGATCAATCGCACCAGAGTCGAGTGTCGATGAAAGATAAGCCTACAGTTGCGGGAGATTATTTGGTGTATGTATCCACCCATGAGGACCCGGGAATTCCTAGGGCCAGTTGGACTGCGGTTTACTCGACCCACTTGAAATCGGGTTCGACCCGGAGACTCACTCCTTCCGGAGTTGCAGATCTTAGCCCCGCAGTCTCACCGTCTGGGATTTTCACCGCCGCAGCTTCTTACGGCGGGAGAGGCTGGACAGGTGAGGTTGCGGATCTCACCACGGATATCTACGTTTTCTTGACTCGGGATGGAACTCAACGAGTCAAAGTGGTCGAACATGGTGGCTGGCCGAGTTGGGTCGATGATCGTACTTTTTACTTTCATCGGAAAGACGATGATGATGGGTGGTGGAGTGTGTACAGAGCAACTTTACCCACTGAAGGTCCGATTTCCACGCAGACGGTGACAATCGAACGGGTCACCCCACCGGGTATTAACGCGTTCACACCCGCAGCCTCACCCGGAAACAAGAATTTCATAGCAGTTGCAACGAGAAGAACAGATTCGGATTATCGTCACATCGAGTTGTTTGATCTGATTTCGAATGAGTTCAAGGAAGTGACTCGTTTGATTTCCCCCGATACTCATCACTATAATCCTTTCATCTCGCCCGATTCAACCCGGATTGGATACCATAAGTGCAGAGGAAAACCCAAAAGAAATGAGAGTCCCCCGTTAATACTAGAGAATATCCGAACTACAATACCCGATCTCACTCTTTTCCGGTTCGATGGTATGTTCCCAGCCTTCTCACCATCAGGTGATCGGATCCTGTTCGTTGATTTGCCTGGAGTTTTTGTTGTGAACTCGGACGGCTCAAACCTGCGTCAGATTTCCAATTCATTCGCCTTCTCCACCGCATGGAACCCGGTTCGACCCGGCATTGTTTACACTGCTGTGGGTCCCAAATTTGCTTCTGAGAGCACGGAAGTTGATATTTACTCCATCGACGTCGACGATGTTGACGAGTATACTCACAAGAGATTGACGCTAAACGGCAAAAACAACGCATTCCCCTCACCTTCACCAGACGGTAAATGGCTCGTGTTTAGGTCGGGTCGGACGGGTCATAAGAATCTATACATAATGGATGCTGTTGATGGGGAGAGAAGTGGGCTTCATAGGTTAACAGAAGGCCCATGGACAGACACAATGTGTAATTGGTCACCTGACGGTGATTGGATCGCTTTTGcgtcggatagggatgacccgGGAAGTGGGAGCTTCGAGCTGTATCTGATTCACCCGAATGGAACCGGGTTGAGGAAGTTGGTTCAAAGCGGGTCGGCCGGGAGGACTAACCACCCGTATTTTAGCCCAGATGGGAAGAGCATAGTGTTTACGTCAGACTATGGGGGTATATCTGCGGAGCCAATATCAGTCCCACATCAATTCCAACCTTACGGTGATATCCACACAATAAAATTAGACGGGTCTGATATACAAAGATTAACCCATGATCCATATGAGAATGGCACGCCTGCATGGTCCCCTAGGTATATTAGGCCACGTAATGTGAAACacccaaagcctaaatcctattGCACTTTTGACGATTGTCATTGGCTCAAAAACAACACTTCTGCTGGAAGCGCTGCTACTCATATGCTTCTacctaaacctcaatgtgctgGTTCAAATTTATTAGACAACAAAATTTCAGCTGAACTTCCTTTGGAGAATGAAGTCACAGAAACAGATTTAACTCCATATGTTGGCATGGAGTTTGAGACTGAAGAACATGCGTATAGATTTTATAATGCATATGCTGGCTTAACTGGATTTAGCATCAGAAGAGAATGGATGAATAAAAGTAAGATGGATCAGAATATTATATTGTCCCGAAATTTTGTATGTTTCAAAGAAGGGTTCAAGAACATAAGTAATTGTGAAGCGAAGAGAGTTCGTAAAGATATCAGAACTGGGTGTTCGGCTCAAATGACCATTGGTCGACAATCAAATGGAAAGTATGCGGTTACAAGTTTTGAGAAGCAACATAATCATACTCTTGCCACCCCTAGAAGCAGACACAAATTACCATCACAGAGAAAAGTTTCTGCTGCTCGAGCCAATCAAATTGAATTGGCAAAGGATTCTGGCATacgacaaaaattaatttttgagttTTTAAGTCGACAAGTTGGAGGAGGAGAGAATGTTGGATGTACTCTTAAGGATGTTAGTAATCATTTGACTTCTAAAAGGATAACAGAAATGGAGGAAGGAGAGGCCTACACTTTGCTTCATTATTTTCAATCAAAGAAATCCACGAACCCATCGTTCTTTTATGAAATTCAACTTGATGCTGAAGATCAAATCACAAACATTTTTTGGGCAGATGCAAAGATGATTGTAGATTATGTTTGTTTTGGAGATATTGTATCTTTTGATACTACTTATCGCACCAACAAAAATTCTCGACCCTTTGCACCATTTCTTGGATTCAATCACCATCGGCAAACTGTTATATTTGGTGCAGCACTATTATATGATGAAACTTCTGAATCATTTGAATGGTTGTTTAAGACTTTTCTTAAGGCCATGTGTGAGAAGAAGCCAAAAACAATTTTTACAAATCAAAATGCCTTCAAAATGCTCTCCGACTAA 3132 0.4253 MKAPNICSLCFLLVFFKFVSCANATATADDQDIDISSGTSIIYYPLGRLYFAFDIYSLPIHSPKPYHETKLTDGHNLNYNGHFPSPSSSSLLFSLLPNQTAINIQSDQPPLQLIYVTERNDGFSNIYFDAVYSDDARNPRRRSALESLGDRIQIPLLSDQSHQSRVSMKDKPTVAGDYLVYVSTHEDPGIPRASWTAVYSTHLKSGSTRRLTPSGVADLSPAVSPSGIFTAAASYGGRGWTGEVADLTTDIYVFLTRDGTQRVKVVEHGGWPSWVDDRTFYFHRKDDDDGWWSVYRATLPTEGPISTQTVTIERVTPPGINAFTPAASPGNKNFIAVATRRTDSDYRHIELFDLISNEFKEVTRLISPDTHHYNPFISPDSTRIGYHKCRGKPKRNESPPLILENIRTTIPDLTLFRFDGMFPAFSPSGDRILFVDLPGVFVVNSDGSNLRQISNSFAFSTAWNPVRPGIVYTAVGPKFASESTEVDIYSIDVDDVDEYTHKRLTLNGKNNAFPSPSPDGKWLVFRSGRTGHKNLYIMDAVDGERSGLHRLTEGPWTDTMCNWSPDGDWIAFASDRDDPGSGSFELYLIHPNGTGLRKLVQSGSAGRTNHPYFSPDGKSIVFTSDYGGISAEPISVPHQFQPYGDIHTIKLDGSDIQRLTHDPYENGTPAWSPRYIRPRNVKHPKPKSYCTFDDCHWLKNNTSAGSAATHMLLPKPQCAGSNLLDNKISAELPLENEVTETDLTPYVGMEFETEEHAYRFYNAYAGLTGFSIRREWMNKSKMDQNIILSRNFVCFKEGFKNISNCEAKRVRKDIRTGCSAQMTIGRQSNGKYAVTSFEKQHNHTLATPRSRHKLPSQRKVSAARANQIELAKDSGIRQKLIFEFLSRQVGGGENVGCTLKDVSNHLTSKRITEMEEGEAYTLLHYFQSKKSTNPSFFYEIQLDAEDQITNIFWADAKMIVDYVCFGDIVSFDTTYRTNKNSRPFAPFLGFNHHRQTVIFGAALLYDETSESFEWLFKTFLKAMCEKKPKTIFTNQNAFKMLSD 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0370 1043 Pfam WD40-like Beta Propeller Repeat 610 625 IPR011659 -
Sto5g0370 1043 Pfam WD40-like Beta Propeller Repeat 562 587 IPR011659 -
Sto5g0370 1043 Pfam WD40-like Beta Propeller Repeat 502 537 IPR011659 -
Sto5g0370 1043 Gene3D - 604 675 IPR011042 -
Sto5g0370 1043 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 40 694 - -
Sto5g0370 1043 SUPERFAMILY DPP6 N-terminal domain-like 420 673 - -
Sto5g0370 1043 Pfam FAR1 DNA-binding domain 759 846 IPR004330 -
Sto5g0370 1043 SUPERFAMILY DPP6 N-terminal domain-like 66 499 - -
Sto5g0370 1043 Gene3D - 157 398 IPR011042 -
Sto5g0370 1043 Pfam MULE transposase domain 968 1036 IPR018289 -
Sto5g0370 1043 Gene3D - 411 582 IPR011042 -
Sto5g0370 1043 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 40 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0370 Sto-Chr5 2266748 2272474 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto5g0370 FAR1 6.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0370 - - aprc:113853220 951.044
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0370 5 2266748 2272474 Sto5g0370 5 2266748 2272474 ECH