Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0359 ATGCTGCAAGCAAGCCCGGCCGGAGAAGGCCGCAACGGAAAACCCGGTGGTCGAACGGTGGTGGTGGGAGTGAAGTTTGATTCTCCCAGCAGAGAGTTGCTCACGTGGGCTCTGGTCAAAGTCGCTCAACCTAGTGATATTGTGGTTGCTCTTCATGTTCTTGGGAATGATGAAATTGTGAATCGAGACGGGAAGGCGTCGCTTCTTTCGCTTGTCAAGGCATTTGACTCTGTTCTTGCTGTTTATGAAGGTTTCTGCAATTTGAAGCAGGTGGATCTCAAGCTCAAGATTTGCAGAGGCTCATCAGTCCGAAAAATCTTAGTTCGAGAAGCAAATGCTTATTCTGCAACTCATGTTATTGTGGGAACTGCTCAAGGCCTTCGTAAAATCCGGCCATCTACCTCCGTAGCTAAGTACTGTGCTAAGAAGTTATCCAAGGACTGCTGGGTTATTGCTGTTAATAATGGAAAAGTTGTGTTCAAGAGAGAAGGCTCTCCAGAAGCTTCTGTTGATTTACAAGGAATCGGTCATCATGGCAGAAATGGCTTGCTTGGTTCAATTCACCGGGCATTGAGTTATAGTTCCAAAGTACTAAATGAGGACAACATAGGAATGCATGAAAAGGGTAGTTGCAAAAATTCCGACAACAGCTTAGCTAAGTTCTTTCTGGATACTACAGAACCCATTCAGAGGCAGAATTGCTCAATTTGTGGTCCAACATCTGGATTGTCAAATACTTCCAGCGACCAATCTGCACGAGAGTCTTCTAGTGATGGTGGTAAAGAGAACTCTTTGGCTATAGTGCTTGCACAGAGTACTGTCAGAGAATTGCCTGAACTAAAGCCTGGTTGGCCACTTCTGCACAGGACAATTACATCAGACCAGCAATCTCCTGGCAGATCATTGGTGCGCCAGATATCTGTGGTTCAGTGGGCAATGCAGTTGCCCTCTAGAAATCTTTCATATACTTCAGATCATGTTAACAAACCAACCAGTTCTGATTCAGGTCAACATCAATCTCTGACTTTAGATGGTGAGAGTGGTGCTATTGTTCCGGTGGATGCTGAAATAGGAATTGCTTCTTCACCTGACCACAACTCAAGGAGAATTCCTAAGGAATTGGAGGGTCTTCATGAGAAATACTCATCCACATGCCGATTGTTTAAGTACCAAGAACTTTTATCAGCTACATCGAATTTCTTGCCTGAAAATTTGATTGGGAAAGGAGGAAGTAGCCAGGTTTATAGAGGCTGCCTTCCTGATGGCAAGGAACTTGCGGTTAAGATCTTAAAGCCTTCAGATGATGTTTTAAAGGAGTTTCTTTTGGAAATAGAAATTATCACTACCTTGCATCACACaaacattatttctctcttggGATTCTGCTTTGAAGATGGCAATCTTCTTTTGGTGTATGATTTCTTATCGAGAGGAAGCCTTGAAGAGAATCTACATGGGAATAAGAAAAATCCACTTGTATTTGGTTGGACTGAGAGGTATAAGGTGGCAGTCGGTGTTGCTGAGGCTTTGGATTATCTGCATAACAAAGATGATCAACCTGTGATCCATAGGGATGTGAAATCATCAAATGTGTTATTGTCTGAAGATTTTGAACCACAGCTCTCTGATTTTGGACTTGCTAAATGGGCATCAACCTCTTCATCACATATAACCTGCACAGACGTTGCTGGAACCTTCGGTTACTTGGCTCCAGAGTATTTCATGTATGGCAAAGTAAATGCTAAGATTGATGTCTATGCATTTGGAGTAGTGCTCCTTGAGCTTCTATCGGGAAGAAAGCCCATAAGTAGTGATTATCCAAAAGGTCAAGAGAGCCTCGTCATGTGGGCAAGTCCAATTCTGAATAGTGGAAAAGTTGCACAATTATTAGATCCAAGTTTGAGTAATAACTACGATCAGGACCAGATGGAGAGGATGGTATTGGCAGCCACGCTCTGTATCAGACGTGCCCCAAGAGCTAGGCCTCAAATGAGCCTTATTACAAAGCTTCTTCAAGGTGATGCTGATGTAATAAAGTGGGCAAGGTTAGAATTGAATGCTTCTGAAACAACAGGAATGCTTGATGATGAAGCCTGTCCACCTTCTAATATACGATCACATCTCAATCTAGCACTTCTTGATGTGGAGGATGATTCGCTCTCCGTGTGCAGTATTGAGCATAATGTATCGTTGGAGGACTACTTGAGAGGCAGGTGGAGCCGCTCTTCAAGCTTTGACTAA 2241 0.4306 MLQASPAGEGRNGKPGGRTVVVGVKFDSPSRELLTWALVKVAQPSDIVVALHVLGNDEIVNRDGKASLLSLVKAFDSVLAVYEGFCNLKQVDLKLKICRGSSVRKILVREANAYSATHVIVGTAQGLRKIRPSTSVAKYCAKKLSKDCWVIAVNNGKVVFKREGSPEASVDLQGIGHHGRNGLLGSIHRALSYSSKVLNEDNIGMHEKGSCKNSDNSLAKFFLDTTEPIQRQNCSICGPTSGLSNTSSDQSARESSSDGGKENSLAIVLAQSTVRELPELKPGWPLLHRTITSDQQSPGRSLVRQISVVQWAMQLPSRNLSYTSDHVNKPTSSDSGQHQSLTLDGESGAIVPVDAEIGIASSPDHNSRRIPKELEGLHEKYSSTCRLFKYQELLSATSNFLPENLIGKGGSSQVYRGCLPDGKELAVKILKPSDDVLKEFLLEIEIITTLHHTNIISLLGFCFEDGNLLLVYDFLSRGSLEENLHGNKKNPLVFGWTERYKVAVGVAEALDYLHNKDDQPVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNAKIDVYAFGVVLLELLSGRKPISSDYPKGQESLVMWASPILNSGKVAQLLDPSLSNNYDQDQMERMVLAATLCIRRAPRARPQMSLITKLLQGDADVIKWARLELNASETTGMLDDEACPPSNIRSHLNLALLDVEDDSLSVCSIEHNVSLEDYLRGRWSRSSSFD 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0359 746 SMART serkin_6 400 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0359 746 ProSitePatterns Protein kinases ATP-binding region signature. 406 428 IPR017441 GO:0005524
Sto5g0359 746 MobiDBLite consensus disorder prediction 322 342 - -
Sto5g0359 746 CDD USP_Like 19 151 - -
Sto5g0359 746 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 15 740 - -
Sto5g0359 746 Gene3D HUPs 17 154 IPR014729 -
Sto5g0359 746 CDD STKc_IRAK 406 673 - -
Sto5g0359 746 ProSiteProfiles Protein kinase domain profile. 400 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0359 746 Gene3D Transferase(Phosphotransferase) domain 1 475 683 - -
Sto5g0359 746 Gene3D Phosphorylase Kinase; domain 1 364 474 - -
Sto5g0359 746 Pfam Universal stress protein family 18 151 IPR006016 -
Sto5g0359 746 PANTHER OS01G0253100 PROTEIN 15 740 IPR045271 GO:0004714|GO:0006468
Sto5g0359 746 SUPERFAMILY Protein kinase-like (PK-like) 381 671 IPR011009 -
Sto5g0359 746 MobiDBLite consensus disorder prediction 237 263 - -
Sto5g0359 746 ProSitePatterns Serine/Threonine protein kinases active-site signature. 521 533 IPR008271 GO:0004672|GO:0006468
Sto5g0359 746 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 151 - -
Sto5g0359 746 Pfam Protein kinase domain 404 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0359 Sto-Chr5 2177126 2180551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0359 387 667 Trihelix Transcription Factor Family AT1G68690 45.455 1.77e-75 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Sto5g0359 Pkinase 7.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0359 - - aprc:113846853 1149.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0359 5 2177126 2180551 Sto9g2863 9 30064036 30067098 CCT
Sto5g0359 5 2177126 2180551 Sto5g0359 5 2177126 2180551 ECH