Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0357 ATGGTAAAACCAAATCATAGGAATCGTGAGACTGAACAATTACATTATACTAGCTATGCTGATGATTCTGGCTCTAATTCTTTTAGAGGTAAAGATCAATTTGAATATTCAGGTTACGGGATGAAaacagaagagagagaaggaagccCTGTTGAGCTTGATATTTCATTTAAATCTAATTCTCTGGTGGCCAAGGCTATTGTGGCGCCTTCAAGTTCTGCAATTGTTTCTGATGCAGATGTGACTTCTGTTTCTGATACAGATTTGACTTctgcagaaaagaaaaaaaatggtttgGTCTCTGACTATGATTTTTCTGATTTAAAACCAGCCAAACCATCTACAGTTACTGCAAACCTAAGTAGTTCACCATGCAAGTCAAATGGTGTCCCTTGTTCTGGCAAGGACTTACAGGAAAATGTCTCTGATTCTCAGCCCTATCCCAGTGCAATTCACAATTTTCATTGTAAAAATGAGGGGGCACAAACCCCAAAGGGAATTGTTCCAGGTGACATTACCAAAAGTTGTTCCGGAAAGACATCTCCAAGGGttactaaaaagaaaaaaattgtgaagAAAGTGGTGAAGAAAGTTGTTTCAAATCCTAATTTACATGTGTCAAGTGCCATATCATCAAGTATGCTTGATAAAACTGTGCAAGCAGATAGTGTGACTTTTAGTCCTTCATTTACCTCTGGATCTGACAAAAGTGAAACTTTTTTGAAGGAGAAAATCACCGCTGTTGGCAAGTTTTCCATGCCAGGCTGTTTGCAGTCGTCTCCAAGTAAAGTACATCTGTTGCCTGATAACAGAAAGGAGGATACACCTCCACTGAGTATGGGGACAGATACCATGTTACAAGTGTACAAGactgatgataattctgaaataGGGGAAGTAGCTAGAGTTGAAAAAAGTGAAAACATTTCTAGTTCTCCACTGGGTGCTGGCAGTATCAAAGATGAAAAGAGTGATTCTGATTGTCTGGATGCAGATAATTTTGTCCATGGCTTGCATTCCATGAAAAACACTGATAAGGTTGCTAATGAAGTGTCCCTATCACCTGGACAATATTCAGATGTGCAGTGTCTAGAGAATAGGTATCGTGTAGAAGATGATACAAACTGCAGACTGTCAAGTTCTGCTGAGAGTGTAATTAACACAGATGTTATAAATACAAGTGATTCTgctaatgttagagtttctggCTTGAGTTTTACAGGTAATTCACAAGAGAAAGTTGCAGTTTGTGACATCAGAAATGATGGCAAGGCTGATTGTGAAAGGAAGGCCATTGCATTAACTGATAATGCTATTTTGGGAGAAAATCAAGAGACTTCCATCCCTGTACCAATCTGTGGAATGGTTGATCATTTTAGTTCGGGAGAAACTACGATTCAAGATGGTCAAGACTGCCTAAAACATTCCAGAGTGCCCATGCATGGTTATGGTAATTGGCCAACTAATTCTGAAGATAATATCACTGTTCCCCATGGTGTTATTGTGAGAGACTCAGGGAAGCAGGCATCCTCCCTGGACTTCACCATGTCTCCAGGGAATTGTGCCACAGAACAATTCCCAAATGCTAAATTTTCAGAAAGATTTGGTGAAGAAGATACAAGGAATTCTAAAAAGAGAAAAGTTGGGACtcatttagaattttcaagTTCAAATATAGGGGGTATATTTCCAGACCCTATACAAACAGTTAGCATTGCAAATGTGGATACAACCTTTAGTCCATTGAAGGATCCAAGTCCTTCTGAAGTTTCAGATGCTGTTGTTCAAAGCTCAGAATTTAGCTTACATGCCAACAAGAGTGGGTTCACTGTTTTAGATGAACAAGGGAAAATTACAGAGGCAGGAGTTTATTTTGGAAATAATGGCGATAACAGTGCAGATAGGGCTTCACCAATGCCTAAAAGAAATGAAGTCACTACTAGTCACCCGAATTTCAGTTTGTGTCAGGCTGAACTTTGTGATGCAATTGTGGTTGCCACATCTTGTGCTGAAGTTCCTATTAGTATTAGTGATAACCAGACACGTCAGAAAGAAGTTGCATTTTCAAGCATTACTAAATGTCCTACTTCTCCAACACTGCCTTACCCAGAAGATAGTGCTAAATTGTATGGCAATAGTTTGGTTGGAGCATCTATTGAATCTATGGATACAAATAGGGGAACTATGACGTCTGAGTGTTCTGAAACCCAACATCCAGGCCTTGAATTTAATTCACTTCATGAGGAATTGGCCAGTCCAAATAATCAGTTTCCAGAGTTGGAAGGTGAGCAGAATGAAAACGGTACTGCAGTTGTGCCTATAAATAATACTCAAGAGGACATTCGGGTTGTTGGAAATACGGAGAGAGAAAAGATTGATATACAGGCTGTTGAAAAATGTGAGTCTATAGATATTGAACAGAGATCTCCAAGTGTTGTCAAATCTAGTGATCTTCAAAGGAAGGATGATTTACCTCTGGAGCAAGACTGTCTGTCCTGCCCAGCTGATACTGATGGAGTAACTATCAGTTACTCCAATGCACTATCAGATATGTTTTCACCAGGGACCACATCAGACATACCTGATAGAAGGATTTCAGATTGTCCAGCAATACACAATGAAAGCATTCCAGTGGATGAAGAAAATGTGGTTAGCAGTTTTATGGTTGAACATGGTTCTGACTTAACTGATTCAACATTACCTTCAGAGCATACTATAGAGAATAGGAAGTTAGATCATGCAACTAAATGTAATAACCTGATCATGGAGAAGATAATGCCACAATCTTTGCAAGTTTATTCCAAAGTTATGACTAAGGGACTGAATTCATCTTGTTCAGAAGGGGGCAAAAATCAGCCAGGTTCTGCCATTCCTACAACTATCCAGGGTCGGTTTGTTTTTCCTAAGTCAAAGACATCTGCATTGTCAACTCATGGTTCAAAACTTCGAACTTGGCATCGTACAGGTAATAACTCTGCTTCTCTACCAGGAAGCAAGCCTTCGGCGGGATTTGCTCCTTCCAAAAGGccaatttcagaaaaaaaaggGAACTTTCAAAATACTTCTTACATTCGTAAAGGTAACAACAGTATTGTAAGGAAACATACTCCAGTTTCTGCTTTACCACAAGGCTCTGTTAATAGGTCTTCTTCTCTGGGGTTTGATGATTTTCATTTTCGAAAGAGCACTGGATCTGAAAGTAAGGTTGACATCACAGATCAAACAAATCTCTTGAAATCAGGAATAACACATACTTCTCCAGAGGGGCAGAGAACACCTCCACCACCTACTGACACTAAATTGCCTAATCAAACAACAACCTCATCTGAGGAGAATAGATCTTCCTCGTTGATAGAGCTTCTTTCCAATGCTGACTGTGATAGTGCTTCAGAACCTAGGAAATTCATGGAATCTTATGATGCATTAAACTCTGCTGAGGATGCACTAAAATCTTATGTACCTGTTGAAACTCAAATGGGTCCATCAAACAATGGGGAGATCCTAGTTGATGCTAACGATGTGAGCGTGTCTTCTttgaattcaaaaaaaatagtCTATGTAAAGCGCAAATCAAATCAGTTGGTTGCATCTTCAAATTCTTGTGATCTATCTGTCACCGCTGACGACACGCAAGCAGCCTCCTCTGATGGCTAttacaagaggagaaaaaatCAGTTAGTTAGGACTGCATTTGAAAGTCATATTAACCAGGCAGTTGGAATGCCCATTGTTGCTGTAAACTCTGAGGGGAAAGGAACTCATAAGGCTGTTTGCAACAGGAGGTTTAGTAAGAAGCGGTCACATAAGGTAGTTGGAACTGCCCGCAAACCTTTGAGAGCCTCATTGGTTTGGACACTATGTGGTGCAAATTCATCCAAAAATGGCAGTGGCGCTGTGCATCATCAGAAGGTGTTGCCTCACCTGTTTCCCTGGAAAAGAGCAACATATTTAAGAAACTTCATTCATAATCCTGCTTTGAGCTCCAATGCTAGTTCATTATCTGCAATCAGCAAGAAATTGGTTCTGTTGAGAAAGAGGGATACTGTTTACACTAGGTCAAGCCATGGATTTTCCCTCAGGAAATCCAAGGTATTAGGTGTTGGTGGATCTAGTTTAAAATGGTCAAAATCCATTGAGAAGTGCTCAAAGAAAGCTAATGAGGAAGCCACACGTGCAGTTGCTGCAGTAGAGAGGAAAAAGAGAGAACAGAAAGATGTTGCTTGTATCAGTTCTCGGGCAAAGAGACAACGTATATTTCGTATTGGTTCAGTTCGTTACAGAATGGACCCTTCTGGGAGGACACTTCATAGGATTTCAGATGACGAGTCCCCGTCCTCTGCATCTATCCCTTCAGGTTTGCATGCAAAAAGATCTTACATTCCAAGGAGATTAGTGATTGGAAATGATGAATATGTACGAATTGGCAATGGTCATCAGCTTATCAGAGACCCAAAGAAGAGGACTCGTATATTGGCTAATGAAAAAATTAGATGGAGTTTGCACACAGCCAGACAGCGGTTGGCCCGAAAGCAGAAGTATTGTCAGTTTTTTACTAGATTTGGAAAATGTAATAAGGATGACAAGAAGTGTCCCTATATACACGATCCCTCAAAAGTTGCTGTCTGTACTAAGTTTCTGAATGGTTTATGTTCTTCTCCCAACTGCAAATTGACTCATAAGGTTATTCCAGAGAGAATGCCAGATTGCTCTTATTTTTTGCAAGGTTTATGCACAAACAGAAATTGCCCATATAGACATGTCAATGTAAACCCTAAGGCATCCGTTTGTGAAGGATTTCTTCGGGGTTATTGTGCGGATGGCAATGAGTGTCCGAAGAAGCACTCCTATGTCTGCCCTAGTTTTGAAGCAACGGGAATCTGTACTCAAGGAACCAAATGCAAACTTCATCACCCCCAAAAACAAAGcaagggaaagaaaaggaagaggtATGGAGATCAGAAGAACAGTAGAGGACGTTACTTTGGTTCAGTACCTATTGATGTTTCTGAATCTGGGGCGACGGTAGCTCCAAGGCAAGAGGAGCAAAATGATGATGACCTTGAAGGAGAACTTGCGGACTATATCAGCCTTGATATCGATGATGAAGAAGTTGCAGAAAGCATTGGTCAGCCAAGCGAGCAAGCAACATTTTCTGACAGTGAACCCTTGGATACTCAAATGGACGATGTTGATGAACTTATAAAACCGGTTCTTATAATGAAAATGGATTCCAGAGTGCAGGAATCTTCAGTTTGA 5256 0.3896 MVKPNHRNRETEQLHYTSYADDSGSNSFRGKDQFEYSGYGMKTEEREGSPVELDISFKSNSLVAKAIVAPSSSAIVSDADVTSVSDTDLTSAEKKKNGLVSDYDFSDLKPAKPSTVTANLSSSPCKSNGVPCSGKDLQENVSDSQPYPSAIHNFHCKNEGAQTPKGIVPGDITKSCSGKTSPRVTKKKKIVKKVVKKVVSNPNLHVSSAISSSMLDKTVQADSVTFSPSFTSGSDKSETFLKEKITAVGKFSMPGCLQSSPSKVHLLPDNRKEDTPPLSMGTDTMLQVYKTDDNSEIGEVARVEKSENISSSPLGAGSIKDEKSDSDCLDADNFVHGLHSMKNTDKVANEVSLSPGQYSDVQCLENRYRVEDDTNCRLSSSAESVINTDVINTSDSANVRVSGLSFTGNSQEKVAVCDIRNDGKADCERKAIALTDNAILGENQETSIPVPICGMVDHFSSGETTIQDGQDCLKHSRVPMHGYGNWPTNSEDNITVPHGVIVRDSGKQASSLDFTMSPGNCATEQFPNAKFSERFGEEDTRNSKKRKVGTHLEFSSSNIGGIFPDPIQTVSIANVDTTFSPLKDPSPSEVSDAVVQSSEFSLHANKSGFTVLDEQGKITEAGVYFGNNGDNSADRASPMPKRNEVTTSHPNFSLCQAELCDAIVVATSCAEVPISISDNQTRQKEVAFSSITKCPTSPTLPYPEDSAKLYGNSLVGASIESMDTNRGTMTSECSETQHPGLEFNSLHEELASPNNQFPELEGEQNENGTAVVPINNTQEDIRVVGNTEREKIDIQAVEKCESIDIEQRSPSVVKSSDLQRKDDLPLEQDCLSCPADTDGVTISYSNALSDMFSPGTTSDIPDRRISDCPAIHNESIPVDEENVVSSFMVEHGSDLTDSTLPSEHTIENRKLDHATKCNNLIMEKIMPQSLQVYSKVMTKGLNSSCSEGGKNQPGSAIPTTIQGRFVFPKSKTSALSTHGSKLRTWHRTGNNSASLPGSKPSAGFAPSKRPISEKKGNFQNTSYIRKGNNSIVRKHTPVSALPQGSVNRSSSLGFDDFHFRKSTGSESKVDITDQTNLLKSGITHTSPEGQRTPPPPTDTKLPNQTTTSSEENRSSSLIELLSNADCDSASEPRKFMESYDALNSAEDALKSYVPVETQMGPSNNGEILVDANDVSVSSLNSKKIVYVKRKSNQLVASSNSCDLSVTADDTQAASSDGYYKRRKNQLVRTAFESHINQAVGMPIVAVNSEGKGTHKAVCNRRFSKKRSHKVVGTARKPLRASLVWTLCGANSSKNGSGAVHHQKVLPHLFPWKRATYLRNFIHNPALSSNASSLSAISKKLVLLRKRDTVYTRSSHGFSLRKSKVLGVGGSSLKWSKSIEKCSKKANEEATRAVAAVERKKREQKDVACISSRAKRQRIFRIGSVRYRMDPSGRTLHRISDDESPSSASIPSGLHAKRSYIPRRLVIGNDEYVRIGNGHQLIRDPKKRTRILANEKIRWSLHTARQRLARKQKYCQFFTRFGKCNKDDKKCPYIHDPSKVAVCTKFLNGLCSSPNCKLTHKVIPERMPDCSYFLQGLCTNRNCPYRHVNVNPKASVCEGFLRGYCADGNECPKKHSYVCPSFEATGICTQGTKCKLHHPQKQSKGKKRKRYGDQKNSRGRYFGSVPIDVSESGATVAPRQEEQNDDDLEGELADYISLDIDDEEVAESIGQPSEQATFSDSEPLDTQMDDVDELIKPVLIMKMDSRVQESSV 1751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0357 1751 MobiDBLite consensus disorder prediction 977 998 - -
Sto5g0357 1751 MobiDBLite consensus disorder prediction 1638 1687 - -
Sto5g0357 1751 PANTHER CCCH ZINGC FINGER 41 1741 - -
Sto5g0357 1751 MobiDBLite consensus disorder prediction 1080 1115 - -
Sto5g0357 1751 ProSiteProfiles Zinc finger C3H1-type profile. 1508 1537 IPR000571 GO:0046872
Sto5g0357 1751 MobiDBLite consensus disorder prediction 1638 1653 - -
Sto5g0357 1751 MobiDBLite consensus disorder prediction 1 16 - -
Sto5g0357 1751 MobiDBLite consensus disorder prediction 17 32 - -
Sto5g0357 1751 ProSiteProfiles Zinc finger C3H1-type profile. 1590 1617 IPR000571 GO:0046872
Sto5g0357 1751 SMART c3hfinal6 1508 1536 IPR000571 GO:0046872
Sto5g0357 1751 SMART c3hfinal6 1563 1588 IPR000571 GO:0046872
Sto5g0357 1751 SMART c3hfinal6 1537 1561 IPR000571 GO:0046872
Sto5g0357 1751 SMART c3hfinal6 1617 1639 IPR000571 GO:0046872
Sto5g0357 1751 SMART c3hfinal6 1590 1616 IPR000571 GO:0046872
Sto5g0357 1751 Coils Coil 1382 1406 - -
Sto5g0357 1751 MobiDBLite consensus disorder prediction 1013 1031 - -
Sto5g0357 1751 Gene3D - 1590 1653 - -
Sto5g0357 1751 MobiDBLite consensus disorder prediction 262 282 - -
Sto5g0357 1751 MobiDBLite consensus disorder prediction 1101 1115 - -
Sto5g0357 1751 Gene3D - 1535 1589 - -
Sto5g0357 1751 ProSiteProfiles Zinc finger C3H1-type profile. 1563 1589 IPR000571 GO:0046872
Sto5g0357 1751 MobiDBLite consensus disorder prediction 977 1031 - -
Sto5g0357 1751 MobiDBLite consensus disorder prediction 1703 1728 - -
Sto5g0357 1751 MobiDBLite consensus disorder prediction 1 34 - -
Sto5g0357 1751 MobiDBLite consensus disorder prediction 1709 1723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0357 Sto-Chr5 2160280 2168456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0357 1514 1643 C2H2 Transcription Factor Family AT2G32930 31.343 2.47e-06 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Sto5g0357 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0357 - - lja:Lj1g3v0268620.1 1541.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0357 5 2160280 2168456 Sto5g0357 5 2160280 2168456 ECH