Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0353 ATGAGGAAGGACTACCAAAACGAAATGCAGTGCGTTTCATGCGCCGATTATTACGGCCGGGAAGACGCCGGCACCTGCAAGGTGTGCTACGAGGAAGCCAACGAGACCGAGGAGGAGCTCAAGACCGAGATCGACGACTTGAAGGCCATAGTTGCGTTTCTCAAGCTCTCGTCTCCCATTAATCATCTTCATACTGATGTTATTTTGGTTGCCTCTGATGGCGTTTCTCATCAGTCCGACCTCCCCGTGCCCGCTCACAGGGCTATTCTGGCAAGTCGCTCCCCAGTTTTCAGAGCAATGTTGGAGAATGATATGGAGGAAAGACGGAGTGGCACCATCAAGATTAGTGATGTAACATATGATGCTCTCCGtgcttttgttaattatttatacactgCAGAAGCGTGCCTTGATGAACAAATGGCGTATGACCTGTTAGTTTTAGCTGAAAAGTATGAGGTGAAGCATCTTAAGACACATTGCGAAAAGTATTTGATGGCCAGACTGAACTGGGACAAAGCAATCGCGAGTTATGCTTTTGCTCATCAACACAATGCCACAAAATTGCAAGATGCAGCCTTGACATTGATCACAGACAACATGGACAAGCTTTTTAAACACGAGGAGTATAATGAACTGGTGGAGAATAATCCCCGTATTGTTGTGGATATATATGAAGCATATCTCTCCAAACAAATTAATACTGCAGCCTGCAAGAGTGCAGGGAACTAG 732 0.4481 MRKDYQNEMQCVSCADYYGREDAGTCKVCYEEANETEEELKTEIDDLKAIVAFLKLSSPINHLHTDVILVASDGVSHQSDLPVPAHRAILASRSPVFRAMLENDMEERRSGTIKISDVTYDALRAFVNYLYTAEACLDEQMAYDLLVLAEKYEVKHLKTHCEKYLMARLNWDKAIASYAFAHQHNATKLQDAALTLITDNMDKLFKHEEYNELVENNPRIVVDIYEAYLSKQINTAACKSAGN 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0353 243 CDD BACK 178 213 - -
Sto5g0353 243 ProSiteProfiles BTB domain profile. 65 139 IPR000210 GO:0005515
Sto5g0353 243 SUPERFAMILY POZ domain 61 166 IPR011333 -
Sto5g0353 243 CDD BTB_POZ_ZBTB_KLHL-like 64 152 - -
Sto5g0353 243 SMART BTB_4 65 169 IPR000210 GO:0005515
Sto5g0353 243 PANTHER SPECKLE-TYPE POZ PROTEIN 8 239 - -
Sto5g0353 243 Gene3D Potassium Channel Kv1.1; Chain A 53 169 IPR011333 -
Sto5g0353 243 Coils Coil 30 50 - -
Sto5g0353 243 Pfam BTB/POZ domain 64 166 IPR000210 GO:0005515
Sto5g0353 243 PANTHER GH01369P 8 239 - -
Sto5g0353 243 Gene3D - 170 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0353 Sto-Chr5 2130816 2132306 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Sto5g0353 BTB 5e-25 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0353 K10523 - pop:7469182 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0353 5 2130816 2132306 Sto5g0353 5 2130816 2132306 ECH