Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0345 ttgTCAATGATGTGGTTCATAGTCTTAGTTGCAGCAGCTACAGTTGCGGCTCAGCCCAAAGCCGGTTGCCCAACCACGTGCGGCGACCTTCACATTCCCTACCCTTTTGGTACAACTCAAGGTTGCTACAAAGATGAGGATTTCTTCATCAATTGCGACACTTCCTCTGCCAAACCAATTGCCAACTACTCCACCACCACCATTCAAGTCTTGGACATCTCCCTCCACGGCCAATTACGCCTCGCCGGCTGGCTTAGCTGGGATTGCTACAATTCCAATGCCGATCACTCTTGGAGCTTCTTTTGGATCAGACTTGGTCAGTTTGCAATATCCAACACCAACAACAAGTTCGTTGTCGTCGGCTGCGACACCTACGCTTTCATCGATGATTTCTGGGGAAGACGTTTCACCACTGGCTGTACTTCTATCTGCAAGAGCCTTGATGACGTCATCAATGCAACTTGCTCTGGTATTGGCTGCTGCTACTCCAGTTTTCCAAAAGGGAACATGGGATATAACGTTACCTTGAAAAGCTATAACAACCACTCCCAAGTTTTGGACTTCAATCCTTGTAGCTATGGTTTTGTGGTGGAAGATGGTGCTTACACTTTCTCCTCCCTCGACCTCATCAACCTTCGTCAAAGAAATGATTTTCCTGTCGTCATTGATTGGGGTATTGGGGATGAAAATTGCTCTCAAGCAACCAAGAATACAACCACCTATGCTTGTATGGATAACACCGTCTGCGTCGATTCTGAAAGTGCTCCTGGTTACTTTTGTACATGTAAAGATGGCTTCCAAGGGAATCCCTACCTCTCTGGTTCTGATGGCTGCcaagACATCGACGAGTGCAGCAACAGAACATCCAACCTCTGTAGTCAAACGTGCCACAATTTGTATGGCACTTACACTTGTTCTTGTCTACCCGGATACAAAGGCAACGGTTTCAAGAATGAAACAGGTTGTGTTTTAGAAGACAAATCTAATGGTTTCCCAGTCATGCAAGTCGCTCTAGGCATCACTGTATCCCTCTTGCTTCTTGGTATTTTCATCTCCTCCTTATGTTGGGtacaaaggaaaagaaagcTCATAATCATAAAAAAGAAGTTCTTTGAGCAAAACGGGGGTATGTTGCTTCAGGAACAACTTTCTGAGCGAATAGGTTATAACGATATGGCAAAGCTTTTTAGCGAAGAGGAGCTTAAAGCAGCCACTGATAACTTTCATGAAAGCAAAATTCTGGGACGTGGAGGCCAAGGAACAGTTTACAAGGGAACATTACCCGACAAAAGAGTGGTTGCAATTAAGAAGTCTAGAATAGCAGACCAAAACCAAGTCAAAGATTTCATCAACGAAGTGCTTCTACTCTCACGAATCAACCACAGGAATGTAGTCAAACTTCTAGGTTGTTGTTTAGAGACAGAGGTACCATTGCTGGTTTATGAATATATCCCCAATAATACTCTACTCCACCATATTGACCCATCAATGAAATTATCATGCCTTCCTTGGAAAACCAGGTTAAGGATAGCTGCTGAAACTGCTGGAGCCATATCATACTTGCATTCTGCGGCTTCCATTCCAATCATTCATAGGGATATAAAGTCTAGCAATATATTATTGGACCATAATTACATCGCAAAGGTATCTGATTTTGGAGCCTCTAGGTTAGTTCCTTTAGATCAGACCCAAATTACTACTCTTGTGCAAGGGACATTAGGATATTTGGACCCTGAGTACCTACAAACCAGCCAGTTAACTGAGAAAAGTGATGTTTATAGCTTTGGGGTGGTGCTTCTGGAGTTGTTGACTGGAAAGAAGGTAGTTGAAGTGAACAGGCCTGAAGAAGATAGAAATCTAGCAATGTACTTTGTTTCTTCGATGAAAAAAGACCGATTGTTTGAGGTTCTAGACAGTAGAGTGGTGGATGAGAAAAATGTAGGGCAACTCAGGGAAGTTGCTATATTGGCAAGTAGATGCATTAGAGTTAAGGGAGAAGAGAGACCAACCATGAAGGAAGTATCAATGGAGTTAGAAGGGCTAATTGCAAAGGAGAAGCATCCATGGGATGGAAAAAATACGAATTCAGAGGAAAATGAACACTTGCTTGGTCAAATATATGGAACTGGCAGTGGCAGTACTAGTAATTCTATGGGGTTTGAAAGCATGAGGAACCAAGTAACATTTGAGATGGAAAGTGGACGATGA 2208 0.4271 LSMMWFIVLVAAATVAAQPKAGCPTTCGDLHIPYPFGTTQGCYKDEDFFINCDTSSAKPIANYSTTTIQVLDISLHGQLRLAGWLSWDCYNSNADHSWSFFWIRLGQFAISNTNNKFVVVGCDTYAFIDDFWGRRFTTGCTSICKSLDDVINATCSGIGCCYSSFPKGNMGYNVTLKSYNNHSQVLDFNPCSYGFVVEDGAYTFSSLDLINLRQRNDFPVVIDWGIGDENCSQATKNTTTYACMDNTVCVDSESAPGYFCTCKDGFQGNPYLSGSDGCQDIDECSNRTSNLCSQTCHNLYGTYTCSCLPGYKGNGFKNETGCVLEDKSNGFPVMQVALGITVSLLLLGIFISSLCWVQRKRKLIIIKKKFFEQNGGMLLQEQLSERIGYNDMAKLFSEEELKAATDNFHESKILGRGGQGTVYKGTLPDKRVVAIKKSRIADQNQVKDFINEVLLLSRINHRNVVKLLGCCLETEVPLLVYEYIPNNTLLHHIDPSMKLSCLPWKTRLRIAAETAGAISYLHSAASIPIIHRDIKSSNILLDHNYIAKVSDFGASRLVPLDQTQITTLVQGTLGYLDPEYLQTSQLTEKSDVYSFGVVLLELLTGKKVVEVNRPEEDRNLAMYFVSSMKKDRLFEVLDSRVVDEKNVGQLREVAILASRCIRVKGEERPTMKEVSMELEGLIAKEKHPWDGKNTNSEENEHLLGQIYGTGSGSTSNSMGFESMRNQVTFEMESGR 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0345 735 SMART egfca_6 280 323 IPR001881 GO:0005509
Sto5g0345 735 SMART egfca_6 228 279 IPR001881 GO:0005509
Sto5g0345 735 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 296 307 IPR000152 -
Sto5g0345 735 SMART serkin_6 408 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0345 735 SUPERFAMILY Protein kinase-like (PK-like) 391 676 IPR011009 -
Sto5g0345 735 ProSiteProfiles Protein kinase domain profile. 408 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0345 735 Pfam Calcium-binding EGF domain 280 315 IPR001881 GO:0005509
Sto5g0345 735 Pfam Wall-associated receptor kinase galacturonan-binding 23 80 IPR025287 GO:0030247
Sto5g0345 735 Gene3D Laminin 283 324 - -
Sto5g0345 735 SUPERFAMILY EGF/Laminin 279 315 - -
Sto5g0345 735 ProSiteProfiles EGF-like domain profile. 280 317 IPR000742 -
Sto5g0345 735 Pfam Protein kinase domain 408 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0345 735 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 8 715 IPR045274 GO:0007166
Sto5g0345 735 Gene3D Transferase(Phosphotransferase) domain 1 484 703 - -
Sto5g0345 735 SMART egf_5 283 323 IPR000742 -
Sto5g0345 735 SMART egf_5 230 279 IPR000742 -
Sto5g0345 735 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 8 715 - -
Sto5g0345 735 CDD STKc_IRAK 414 681 - -
Sto5g0345 735 ProSitePatterns Calcium-binding EGF-like domain signature. 280 305 IPR018097 GO:0005509
Sto5g0345 735 Gene3D Laminin 236 282 - -
Sto5g0345 735 Gene3D Phosphorylase Kinase; domain 1 380 483 - -
Sto5g0345 735 CDD EGF_CA 280 313 - -
Sto5g0345 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 529 541 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0345 Sto-Chr5 2073031 2075506 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0345 3 735 Receptor kinase-like Gene Family AT1G21230 47.503 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Sto5g0345 Pkinase 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0345 - - qlo:115959581 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2842 9 29938177 29940609 Sto5g0345 5 2073031 2075506 CCT
Sto5g0345 5 2073031 2075506 Sto5g0345 5 2073031 2075506 ECH