Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0344 ATGTCAAGTTCTGTAATCACTTTGAGCTTGTTCATACTTGTAGCGACGGCAACGTCCGTAGCGTCTCAGGCCAAACCTGGTTGCAGAAGCACGTGCGGCGACCTTAACATTCCGTACCCTTTTGGTACGAGTGAAGGTTGTTACAGAGACCCCAATTTCCTCATATCCTGCGACACCTCCTCTGGCAAGCCAATCGCAAATTACTCGAATGGTAATATTCAAGTTTTGGACATCTCTCTCGATGGTGAATTACGCTTCTCCGGTTGGGTGAACTGGGATTGCTACGATTCCTCTGGCCCTTCTTCTTCCAACTTCTTGTGGTTCCAACTTCGTCAGTTTGCTATATCCAACACCAAGAACAAGTTCGTCGTCATCGGCTGCGATACCTACGCTTTCATCGATGATTTCTGGGGAAGAAGGTTCTCCACCGGATGCACCTCCGTTTGCAAGAACCTCGATGACGTCATCAATGGAACTTGCTCTGGCATTGGCTGCTGCTTCACCAGTTTCCCCAAAGGAAACATGGGTTACAATGTTACCTTGAAAAGCTATAGGAACCACTCCCAAGTTTTGGACTTTAATCCTTGCAGTTTTGCTTTTGTGGTCGAAGATGGTGCTTACAATTTCTCCTCCTTGGACCTCGTCAATCTCCGGAACAAGAAGGATTTCCCTATGATCGTCGATTGGGGTATTGGGAATGAAAATTGCTCTCAAGCAATGAAGAACACAAGCACCTATGCTTGTATGGACAACAGCTTCTGCCTCGATTCTCAAAATGCTCCTGGCTACCTCTGCAAATGCAAAGACGGGTTTCGAGGGAATCCTTACCTCTCTGGTTCTGATGGTTGCCAagATGTTGACGAGTGCCGCAACAGCACACTCAATTACTGCAGTCAAACGTGCCACAATTTGTACGGCAGTTATGGTTGCTCTTGTCTACGAGGATACAGAGGTGACGGTTTCAAGAATGGAACAGGTTGCGTTTCACAGCACAAATCTAATGGTCTCCCAGTTATCATATCGCTATTGGTTCTTGGTACTGTCATATGCTCCTTATGCTGGGTACAAAGGAAAAGACAGCTcataaatattaagaaaaagtTCTTCGAGCAAAACGGAGGAATACTGCTTCAGGAACAACTTTCTGGGAGACAAGGTTACGATGAAATGGCCAAGTTATTCAGTGAAGAGGAGCTCAAAAAAGCCACCGGTAATTTCCATGAAAGCAACATTCTTGGGCGTGGAGGCCAAGGAACAGTTTACAAGGGAACATTACCAGATAAAAGAGTGGTTGCCATTAAGAAGTCCAGAATAGCAGACCAGAGCCAAGTCAAAGATTTCATCAATGAAATGCTTCTACTCTCACGAATCAACCACAGAAACGTGGTCAAACTTCTGGGTTGTTGTCTGGAAACTGAAGTTCCCCTACTAGTTTATGAATATATCTCCAATAATACTTTGCTCCACCATATCAATCCATCAATAAAAACATCATGCCTTCCATGGGAGATTCGGTTGAGGATAGCTGCTGAAACTGCTGGAGCCATATCATACTTGCATTCTGCAGCTTCCATTCCAATCATTCATAGGGATATAAAATCTAGTAACATACTGTTGGaccataattacatagcaaagGTATCTGATTTTGGAGCCTCCAGGTTGGTTCCTCTGGACCAGACCCAAATTACCACTCTTGTGCAAGGGACATTAGGATACTTGGATCCTGAGTATCTACTAACTAGCCAATTAACTGAAAAAAGTGATGTTTATAGCTTTGGAGTTGTGCTTATAGAGTTGTTGACTGGAAAGAAGGTAGTTGAAGTGGACAGGCCAGAAGAAGACAGAAATTTAGCCATGTACTTCATTTCTTCGATGAAAAATGATCGCTTGCTTGAGGTTTTAGACAGTAGAGTGGTGGATGAGAAAAATGTAGGGCAACTCAAGGAAGTTGCTGTTTTGGCAAGTAGATGTATAAGAGTAAAGGGAGAAGAAAGACCAACCATGAAGGAAGTATCAATGGAGCTAGAAGGGCTAATAGCAATGCAGAAACATCCATGGGATGGTAAATATACGAATTCAGAGGAAAATGTATACTTGCTTGGTCAAATATATGAAACTGGCACTGGCAGTACTAGTAATTCTTTGGGGTTAGAAAGCATATGGAGAGAACTGGTTACTGACATGAAAAGTGGGCGATGA 2202 0.4296 MSSSVITLSLFILVATATSVASQAKPGCRSTCGDLNIPYPFGTSEGCYRDPNFLISCDTSSGKPIANYSNGNIQVLDISLDGELRFSGWVNWDCYDSSGPSSSNFLWFQLRQFAISNTKNKFVVIGCDTYAFIDDFWGRRFSTGCTSVCKNLDDVINGTCSGIGCCFTSFPKGNMGYNVTLKSYRNHSQVLDFNPCSFAFVVEDGAYNFSSLDLVNLRNKKDFPMIVDWGIGNENCSQAMKNTSTYACMDNSFCLDSQNAPGYLCKCKDGFRGNPYLSGSDGCQDVDECRNSTLNYCSQTCHNLYGSYGCSCLRGYRGDGFKNGTGCVSQHKSNGLPVIISLLVLGTVICSLCWVQRKRQLINIKKKFFEQNGGILLQEQLSGRQGYDEMAKLFSEEELKKATGNFHESNILGRGGQGTVYKGTLPDKRVVAIKKSRIADQSQVKDFINEMLLLSRINHRNVVKLLGCCLETEVPLLVYEYISNNTLLHHINPSIKTSCLPWEIRLRIAAETAGAISYLHSAASIPIIHRDIKSSNILLDHNYIAKVSDFGASRLVPLDQTQITTLVQGTLGYLDPEYLLTSQLTEKSDVYSFGVVLIELLTGKKVVEVDRPEEDRNLAMYFISSMKNDRLLEVLDSRVVDEKNVGQLKEVAVLASRCIRVKGEERPTMKEVSMELEGLIAMQKHPWDGKYTNSEENVYLLGQIYETGTGSTSNSLGLESIWRELVTDMKSGR 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0344 733 SMART egfca_6 233 284 IPR001881 GO:0005509
Sto5g0344 733 SMART egfca_6 285 328 IPR001881 GO:0005509
Sto5g0344 733 SMART serkin_6 406 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0344 733 SUPERFAMILY EGF/Laminin 284 320 - -
Sto5g0344 733 Gene3D Phosphorylase Kinase; domain 1 379 481 - -
Sto5g0344 733 ProSitePatterns Calcium-binding EGF-like domain signature. 285 310 IPR018097 GO:0005509
Sto5g0344 733 Gene3D Transferase(Phosphotransferase) domain 1 482 698 - -
Sto5g0344 733 ProSiteProfiles EGF-like domain profile. 285 322 IPR000742 -
Sto5g0344 733 Pfam Protein kinase domain 406 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0344 733 Pfam Calcium-binding EGF domain 285 320 IPR001881 GO:0005509
Sto5g0344 733 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 13 713 IPR045274 GO:0007166
Sto5g0344 733 SMART egf_5 235 284 IPR000742 -
Sto5g0344 733 SMART egf_5 288 328 IPR000742 -
Sto5g0344 733 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Sto5g0344 733 Pfam Wall-associated receptor kinase galacturonan-binding 28 82 IPR025287 GO:0030247
Sto5g0344 733 CDD STKc_IRAK 412 679 - -
Sto5g0344 733 ProSiteProfiles Protein kinase domain profile. 406 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0344 733 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 13 713 - -
Sto5g0344 733 SUPERFAMILY Protein kinase-like (PK-like) 388 687 IPR011009 -
Sto5g0344 733 Gene3D Laminin 233 321 - -
Sto5g0344 733 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 301 312 IPR000152 -
Sto5g0344 733 CDD EGF_CA 285 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0344 Sto-Chr5 2068363 2070970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0344 4 733 Receptor kinase-like Gene Family AT1G21230 46.586 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Sto5g0344 Pkinase 4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0344 - - vvi:100252663 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0344 5 2068363 2070970 Sto9g2841 9 29934149 29936613 CCT
Sto5g0344 5 2068363 2070970 Sto5g0344 5 2068363 2070970 ECH