Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0329 ATGGTTCCTTCAGGGCCATCCACGCCAATTGGTGGTGTCCAGTCTGTCTCATCCTCCCTTATAAGATCTAATTCTGGAATAATGGGAGGTCAAGGGGGTTCTGTGCCTTCCCAGACTTCTTTTTCTTCCCTTGTATCACCACGAACTCAGTTTAGCAACATAAATACGCTAGGCAATATGTCCAATGCATCTTCCATACTGAATCAATCTTTCCCAAGCAGTGTTCCAAATTCTGGATTCTCTGGTTCTGTAAGTAGTCATTGTGGAGGTGTTGATTCGGGAGCTGAAAGAGATCCACTTTCCAGCGTTGGCAATGGAATGAGTTTCAGTAATACTTCATCCTCATTTATACAACCAAATATGGTGAACTCTGGTTCATCTGGTCAAGGTCAGGGTCATCAATTTTCTAATCCTTCTGGTAATCAGCTGTTGCAGGAACAACAGCATTCCCAACAACTTGAATCTCATAACTTCCAGCATAATCAGCAAGCAATGCAACAGTTCTCTGCTCCTCTGAACAGTCAGCAACAACAGCAGCAACATTTTCAATCTATTCGAGGTGGTTTAGGTGGCGTTGGACCAGTAAAGTTGGAGCCCCAGGTAAACAACAATCAACTTGGACAGCCGCAGCAGCCTTTGCAATCTTTGAGGAATCTTGCTCCAGTGAAATTGGAGCCTCAGCAAATTCAAACAATGAGAAGTCTGACACCAGTAAAAATGGAACCCCAGAATTCTGATCAGCCATTATTTTTGCATCAACAGCAACAAcaacagcagcagcagcagcagctccTCCAAATGTCAAGGCAATCCTCTCAAGCTGCTGCTGCTCATATGAATCTTCTGCAACAACAGAGACTTGTGCAAATGCAACAGCAACAGCAACAACTCTTAAAAGCAATGCCTCAACAACGGTCTCAATTACAACAGCAGTTTCAGCAGCAGAATATGCCTTTAAGGTCTCCTGTAAAACCAGTATATGAACCTGGAATGTGTGCTAGGCGGCTGACTCTTTACATGTGTCAGCAGCAGCATCGACCTGAAGACAACAATATTGAGTTCTGGAGGGCATTTGTTGCTGAATATTTTGCTCCTAATGCCAAAAAGAAGTGGTGTGTTTCAATGTATGGAAGTGGCAGGCAAACAACTGGAGTTTTTCCTCAGGATGTGTGGCACTGTGAAATATGTAACCGCAAGCCTGGCCGTGGGTTTGAAGCAACCGCTGAGGTTCTTCCTAGACTGTTTAAAATAAAGTATGAAAGTGGGACCTTAGAAGAACTACTTTATGTTGACATGCCTCGAGAATATCCCAATTCCTCTGGTCAGATTGTCCTGGATTATGCAAAAGCAATACAAGAAAGCGTTTTTGAGCAACTTCGTGTTGTACGTGACGGTCAGTTGCGAATAGTTTTCTCTCCAGACCTGAAGATATGCTCCTGGGAATTTTGTGCTCGCCGTCATGAAGAGCTTATCCCCAGAAGATTGTTAATACCTCAGGTTAGTCAGCTTGGAGCAGCTGCTCAAAAATACCAGGCGTTTACTCAAAATACAACACCTAAGTTATCTGTTCCAGAGATACAAAATAATTGCAATATGTTCGTTGCATCAGCCCGTCAGCTGGCAAAAGCCTTAGAAGTGCCATTAGTTAATGATTTAGGATATACAAAGAGATACGTCCGTTGTCTACAGATATCTGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGCCGAGAAACAGGGACTGGACCTATGGAGAGCTTGGCCAAATACCCCCGTAGATCAGGTGTTCCGTCTGGACTCCGATGTCAAGCTCGACAGAACGAAGATCAATTACAGCAGCAACAACACCAACAACAGCAAATGATGGCCAATAATTCGAATGGTGATCAAAATCCAGTGCAAGCTGCTGCCATGCAAATTGCTTCGAGCAATGGTGTGGCTAGTGTAAATACCTCTGTCAACTCAGCATCTGCATCAACCACCACAAGCACCATTGCTGGACTTCTTCATCAGAACTCTATGAATTCTAGACAACAAAGTTCAATGATTTCATCCCCAGGTTCTTCCAGTACAGCACCACAGGTACAACAAAACCCATCACCTTTTCAGTCGCCAACACCTTCATCCAACAACCCCTCGCAAACATCTCACTCTGCCTTAGCAGCTGCCAATCACACAAGTACAACAAACGCACCAGCTAATGTGTCCTTGCCCCAACAGCAGTCATCTCTCTCTTGTGATGCTGACACTAGTGACGCTCAGAGTTCAGTCCAGAAAATCCTACACGACATGATGATGTCCTCCCAAATAAATGGCACAGTTGGAATGGGAGGTTCTGGTTCCCTTGCAAATGACGTCAAAAATGTAAATGGGATCCTTCCAGCGAGTACCAATACAGGTCTCAACAGTGGGAACTGCCTGGTGGGCAATGGAGCTGTGAATAGTAATTCAGGTGTTGGGGTTGGAGGATTTGGCTCTATGGGTGGTGGACTTGGTCAATCTGCTTTGGTCAATGGACTCAGAGCTGCAATAGGGAATAATTCAGTCATGAATGGGAGGGCACTAGGATCTGTTCCTCGGGACCAATCTATGAATCAGCAGGATTTGTCGAACCAATTACTTAGTGGGTTGGGTGCAgtacataattataataaacttCAATTTGATTGGAAGACGTCCCCATAG 2691 0.4363 MVPSGPSTPIGGVQSVSSSLIRSNSGIMGGQGGSVPSQTSFSSLVSPRTQFSNINTLGNMSNASSILNQSFPSSVPNSGFSGSVSSHCGGVDSGAERDPLSSVGNGMSFSNTSSSFIQPNMVNSGSSGQGQGHQFSNPSGNQLLQEQQHSQQLESHNFQHNQQAMQQFSAPLNSQQQQQQHFQSIRGGLGGVGPVKLEPQVNNNQLGQPQQPLQSLRNLAPVKLEPQQIQTMRSLTPVKMEPQNSDQPLFLHQQQQQQQQQQQLLQMSRQSSQAAAAHMNLLQQQRLVQMQQQQQQLLKAMPQQRSQLQQQFQQQNMPLRSPVKPVYEPGMCARRLTLYMCQQQHRPEDNNIEFWRAFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYPNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAFTQNTTPKLSVPEIQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLAKYPRRSGVPSGLRCQARQNEDQLQQQQHQQQQMMANNSNGDQNPVQAAAMQIASSNGVASVNTSVNSASASTTTSTIAGLLHQNSMNSRQQSSMISSPGSSSTAPQVQQNPSPFQSPTPSSNNPSQTSHSALAAANHTSTTNAPANVSLPQQQSSLSCDADTSDAQSSVQKILHDMMMSSQINGTVGMGGSGSLANDVKNVNGILPASTNTGLNSGNCLVGNGAVNSNSGVGVGGFGSMGGGLGQSALVNGLRAAIGNNSVMNGRALGSVPRDQSMNQQDLSNQLLSGLGAVHNYNKLQFDWKTSP 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0329 896 Coils Coil 606 626 - -
Sto5g0329 896 MobiDBLite consensus disorder prediction 579 632 - -
Sto5g0329 896 MobiDBLite consensus disorder prediction 103 155 - -
Sto5g0329 896 MobiDBLite consensus disorder prediction 89 155 - -
Sto5g0329 896 Pfam LIM-domain binding protein 335 589 IPR029005 -
Sto5g0329 896 MobiDBLite consensus disorder prediction 602 632 - -
Sto5g0329 896 MobiDBLite consensus disorder prediction 676 753 - -
Sto5g0329 896 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 894 - -
Sto5g0329 896 PANTHER LIM DOMAIN-BINDING PROTEIN 1 894 IPR029005 -
Sto5g0329 896 MobiDBLite consensus disorder prediction 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0329 Sto-Chr5 1959905 1966410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0329 1 892 C2H2 Transcription Factor Family AT1G43850 58.174 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0329 - - gmx:100799771 1152.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0329 5 1959905 1966410 Sto5g0329 5 1959905 1966410 ECH