Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0318 ATGAATAGTGAGGGGAATATGGATAAGGGGTGTGTTGAGATGGGTAGGTGTTGGTTGGTTGGCGTTTTGATTGTGGTGACCCATACATGCTTGCTGGAAGGGTACCCCTCTGAGGATCTGGTTGTGACTTTGCCTGGCCAACCCAAGGTTGAGTTTAGGCAATATGCTGGTTATGTTGATGTTGATGTTAACCATGGAAGAAGCTTGTTCTACTACTTTGTCGAGGCAGATAAAGACCCTCACCACAAGCCCCTCACCCTCTGGCTCAATGGAGGTCCGGGATGTTCCTCCATTGGGGGAGGTGCCTTTACTGAATTGGGTCCCTTTTATCCTGGAGGCGATGGCCGTAGTCTCCGAAGAAACTCCATGTCTTGGAACAGAGCATCCAACCTCTTGTTTGTGGAGTCTCCTGCTGGAGTTGGATGGTCATACTCTAACACAACTTCCGATTATAACACTGGAGATGCTTCCACTgCCAATGATATGTATTTATTCATGCTGAAATGGTACGAGAAATTTCCAACATTTAGAACAAGGGAGCTATTCCTTACTGGAGAAAGCTATGCAGGACATTACATACCACAGTTGGCCGATGCTCTACTAAACCATAATGACGTTTCAACtgatttcaaattcaatattaAAGGAGTCGCAATTGGAAACCCACTTCTGAGACTTGATCGGGACATTCCATCAACATATGAATTCTTCTGGTCTCATGGAATGATTTCTGATGAAATTGGGCTTACCATTATGAATGAATGCGAATTTGATGATTATGCCTTTGCAAGTCCTCACAATGTGTCCCATTCATGCAATCATGCCATCTCTGAAGCAAATCGCATCGTTGGCGACTATATAAACAACTATGATGTGATTCTGGATGTTTGCTACCCATCCATAGTTGAGCAAGAACTGAGGTTAAAAAAGATGGCTACTAAAATAAGTTTGGGCGTAGATgtttgtatgacttatgaaagaCGTTTTTATTTCAATCTGCCTGAGGTTCAGAAGGCTCTCCATGCAAATCGTACCAATCTACCTCATCCCTGGTCTATGTGTAGTAGCGTTCTAAATTATAGTGATACGGATGGGAACATTAATATCCTTCCAATTCTGAAAAGGATAATTCAAAATCATATCCCGGTTTGGGTTTTCAGCGGGGACCAAGACTCTGTTGTGCCACTAATGGGTTCTCGGACATTGGTTCGTGAACTAGCCCATGACCTGAAATTCAACGTGACTGTAGCATATGGAGCTTGGTTCCACAAAGGCCAGGTTGGAGGTTGGGCAACGGAATATGGAAATTTGTTGACTTTTGCCACAGTGAGAGGGGCTGCTCACATGGTACCCTATGCACAACCATCAAGATCTCTCCATTTATTCACTTCCTTCCTCCGTGGCCGCAGATTGCCAAACGCCACTCCTCCATCCACTGATGATTAA 1446 0.4336 MNSEGNMDKGCVEMGRCWLVGVLIVVTHTCLLEGYPSEDLVVTLPGQPKVEFRQYAGYVDVDVNHGRSLFYYFVEADKDPHHKPLTLWLNGGPGCSSIGGGAFTELGPFYPGGDGRSLRRNSMSWNRASNLLFVESPAGVGWSYSNTTSDYNTGDASTANDMYLFMLKWYEKFPTFRTRELFLTGESYAGHYIPQLADALLNHNDVSTDFKFNIKGVAIGNPLLRLDRDIPSTYEFFWSHGMISDEIGLTIMNECEFDDYAFASPHNVSHSCNHAISEANRIVGDYINNYDVILDVCYPSIVEQELRLKKMATKISLGVDVCMTYERRFYFNLPEVQKALHANRTNLPHPWSMCSSVLNYSDTDGNINILPILKRIIQNHIPVWVFSGDQDSVVPLMGSRTLVRELAHDLKFNVTVAYGAWFHKGQVGGWATEYGNLLTFATVRGAAHMVPYAQPSRSLHLFTSFLRGRRLPNATPPSTDD 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0318 481 PANTHER CARBOXYPEPTIDASE 18 475 - -
Sto5g0318 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Sto5g0318 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
Sto5g0318 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Sto5g0318 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 438 451 IPR001563 GO:0004185|GO:0006508
Sto5g0318 481 SUPERFAMILY alpha/beta-Hydrolases 31 474 IPR029058 -
Sto5g0318 481 ProSitePatterns Serine carboxypeptidases, serine active site. 183 190 IPR018202 GO:0004185
Sto5g0318 481 Gene3D - 322 358 - -
Sto5g0318 481 Gene3D alpha/beta hydrolase 36 298 IPR029058 -
Sto5g0318 481 Pfam Serine carboxypeptidase 46 468 IPR001563 GO:0004185|GO:0006508
Sto5g0318 481 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 475 IPR001563 GO:0004185|GO:0006508
Sto5g0318 481 Gene3D - 369 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0318 Sto-Chr5 1897525 1900552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0318 328 471 Calmodulin-binding Proteins AT2G22960 25.000 1.21e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0318 K16297 - gmx:100801752 835.099
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0318 5 1897525 1900552 Sto5g0318 5 1897525 1900552 ECH