Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0279 ATGTCTTGGAATTCAAGATCAGTGGCAGTGGCAAAGGAGAAACAAGTGGGTAAAAGTAAAACAGGGAGAgtagtggaagaagaagaaggggagaaGGAAAATAGTAGTAAGAGAGTGAATGTGACGAGAGAATTGCAGATAAAGGCAATAAGCAATAAAGAGGGGAAGAATATGGAAATGGATAAAGAAGTGGTTCTTCGGCGTATTCGTCAGAGGAAGCGTGTGAACAAGTTGAGAGCAGCTCTCCAAGCCCTCTGTGAGAAAAAGGAGAACCCCTATCTATCATATCATCTTTGCCCTACTCTTGATGCCACTTCCAACACCAAAATTTCCATGGGCGCCCAAACAGACTGCCACCAAACATGCAAttcaaaatcaatcaaaagctTCTCTTACCCTTTTGGATTTTCCTCCGGCTGCAAAATCCGCCTCAACTGCACCCCCGGCGGCGGAATTTTGATCGGCGACTACCCTGTTCACTCTATTAACTCAGATACCATAATCGTGAGCGTGAAATCCCAATGCAATCGACCATTAGATAGCCTCCGCCCACTCTTCTCCGAGAAATACGCGCCCACCACACGAAACGCTATTCTCTTACAAAATTGCAGCGAAACGGTGTCGCCCTGCGTCATACCGGAGACGATGGTGCAGACTCACTTCGAGTTCCAAAACTGCAACTCCGGCGCTGGCAATTTGAGTTGCTATTACGAGAACAGCACCAGAGGATTTATGAGTTACCAGAATTTAACGAAAAGCCACTGTAGCTACCTTATGTCGTCCATAGCGGCAGAGGATGTGAGCGACATTTGGGGTACCAAAACAGAGACGGCGTTATCATTTGAGGTTGAGACGATTGAGCTAGGATGGTGGCTTCAAGGTCATTGTCAATGTTCTCCGGAAGCTAATTGTACCACACTGGACTCGCCTGTTGATAAGAAGCCGGCGTATCGCTGCCGTTGCAAGGAAGGCTTCGTCGGTGACGGTTATTCCGCCGGAAAGGGTTGCCGGAAAGCCTCTTCTACATGCAACCCAGCAAAGTACATGTCCGGCCAATGTGGAGGGACAACCAGATTTGTCGTCTTAATTGGAGGAATagtgtttggggctttcttaatGGTGGGTTTGGGTCTAATATGTTGTTTCTTTCGGCGGCGGTCCAAATTAAGAGTGACCAAGAGCACAAAAAGACGCTTAACTGAAGCTACTAGCAATCACAGCGTTCCCATATATACCTACAAAGACATTGAGAGAGCCACAAATAGCTTCTCAGACAAACAGAGGCTTGGAACTGGGGCTTATGCCACAGTTTATGCTGGAAAACTTCACAATCACGAATGGGTTGCCATCAAACGGATCAAACATAGAGACACTGACAGTATTGAGAAAGTGATGAACGAGATCAAGCTCATTTCCTCTGTGAGCCATCCCAATCTAGTCCGCTTGTTGGGTTGCTCCATAGAATATGGAGAACAAATCCTTGTGTACGAGTTCATGCCCAATGGAACACTCAACCAACATTTGCAAAGGGAGAGAGGGAATGGACTTACATGGCCGGTTCGACTCACAATTGCCACTGAAACAGCGCAAGCCATAGCACATCTCCACTCTGCCATTAATCCCCCCATTTACCATAGAGACATCAAGTCAAGCAACATATTGCTGGACTACCACTTTCGATCCAAAGTTGCAGACTTTGGTCTTTCTAGACTTGGGATGACCGAAATATCCCACATTTCAACTGCCCCACAAGGAACACCTGGCTATGTTGATCCACAATACCATCAAGATTTTCACCTCTCTGATAAAAGTGATGTATATAGCTTCGGTGTTGTTCTTGTTGAGATCATAACGGGATTGAAAGTGGTGGACTTTTCTCGTCCTCAGAGTGCAGTAAATTTGGCTTCTTATGCCAGTGACAGGATTGGAAAGGGGATGCTGGATGAGATTATAGACCCATTCCTGGAAGCAAATAGGGATGCTTGGACTTTTTCCTCTATGCACAAGGTAGCTGAGCTAGCATTTCGATGCCTTGCATTCCACAGGGACATGAGGCCTGCAATGACAGAAGTGGCAGCTGAGTTAGAGCAGATCAGGCTAAGCAGGTGGACAGCTTTTGAAGACAACAATAATGGTATAGGTACAGCCTCAACAGAGttgtcctcctcctcctcatcttcttcctctaaTGAAAGTGAGAAACCACTGAGTGTGAAAACAGAGGAGGAGGGTAAAGGGCTCCTGAGGTTGCATACTGAACCTCCCGCTTTAAACCCAATGGAAAAGCCCAGGGATAGTTCACCGGTTTCAGTGCAAGACCCACATTTCTGGCTCAGCCAACATAGCTCTCCTTCATCTAATAGCTTGCTCAGTAAATCATTTGGCTGA 2388 0.4468 MSWNSRSVAVAKEKQVGKSKTGRVVEEEEGEKENSSKRVNVTRELQIKAISNKEGKNMEMDKEVVLRRIRQRKRVNKLRAALQALCEKKENPYLSYHLCPTLDATSNTKISMGAQTDCHQTCNSKSIKSFSYPFGFSSGCKIRLNCTPGGGILIGDYPVHSINSDTIIVSVKSQCNRPLDSLRPLFSEKYAPTTRNAILLQNCSETVSPCVIPETMVQTHFEFQNCNSGAGNLSCYYENSTRGFMSYQNLTKSHCSYLMSSIAAEDVSDIWGTKTETALSFEVETIELGWWLQGHCQCSPEANCTTLDSPVDKKPAYRCRCKEGFVGDGYSAGKGCRKASSTCNPAKYMSGQCGGTTRFVVLIGGIVFGAFLMVGLGLICCFFRRRSKLRVTKSTKRRLTEATSNHSVPIYTYKDIERATNSFSDKQRLGTGAYATVYAGKLHNHEWVAIKRIKHRDTDSIEKVMNEIKLISSVSHPNLVRLLGCSIEYGEQILVYEFMPNGTLNQHLQRERGNGLTWPVRLTIATETAQAIAHLHSAINPPIYHRDIKSSNILLDYHFRSKVADFGLSRLGMTEISHISTAPQGTPGYVDPQYHQDFHLSDKSDVYSFGVVLVEIITGLKVVDFSRPQSAVNLASYASDRIGKGMLDEIIDPFLEANRDAWTFSSMHKVAELAFRCLAFHRDMRPAMTEVAAELEQIRLSRWTAFEDNNNGIGTASTELSSSSSSSSSNESEKPLSVKTEEEGKGLLRLHTEPPALNPMEKPRDSSPVSVQDPHFWLSQHSSPSSNSLLSKSFG 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0279 795 Gene3D Laminin 291 333 - -
Sto5g0279 795 Gene3D Phosphorylase Kinase; domain 1 384 498 - -
Sto5g0279 795 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 14 109 763 - -
Sto5g0279 795 Pfam Protein kinase domain 424 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0279 795 PIRSF SRK 351 745 IPR024171 GO:0004674
Sto5g0279 795 PIRSF SRK 11 147 IPR024171 GO:0004674
Sto5g0279 795 PIRSF SRK 214 362 IPR024171 GO:0004674
Sto5g0279 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 543 555 IPR008271 GO:0004672|GO:0006468
Sto5g0279 795 MobiDBLite consensus disorder prediction 714 795 - -
Sto5g0279 795 SMART serkin_6 423 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0279 795 SUPERFAMILY Protein kinase-like (PK-like) 399 696 IPR011009 -
Sto5g0279 795 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 109 763 IPR045274 GO:0007166
Sto5g0279 795 MobiDBLite consensus disorder prediction 16 39 - -
Sto5g0279 795 MobiDBLite consensus disorder prediction 772 795 - -
Sto5g0279 795 MobiDBLite consensus disorder prediction 714 734 - -
Sto5g0279 795 Gene3D Transferase(Phosphotransferase) domain 1 499 718 - -
Sto5g0279 795 ProSiteProfiles Protein kinase domain profile. 423 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0279 795 ProSitePatterns Protein kinases ATP-binding region signature. 429 451 IPR017441 GO:0005524
Sto5g0279 795 MobiDBLite consensus disorder prediction 735 749 - -
Sto5g0279 795 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0279 Sto-Chr5 1647619 1658955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0279 109 790 Receptor kinase-like Gene Family AT2G23450 51.804 0.0 690
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Sto5g0279 Pkinase 1.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0279 - - gmx:100777480 945.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0279 5 1647619 1658955 Sto5g0279 5 1647619 1658955 ECH