Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto5g0270 | ATGGGTTGGCTTAGCAAAATTTTTAAGGGATCCGACCATAAAATTTCCGAAGGGCATTATAATGCAAACTATAGAGAGGATACTGATTTTTACTTACCATCAACTTCAGGGGATGTCTGGtcagagaatgagaatgaagatATAGATCGTGCTATTGCACTATCTCTTGCAGAGGAAAATCAGAAAGGAAAGAACGTAAATGACTTCAATTCACAATTAGAAGAAGATGAACAACTTGCTAGAGCTTTACAAGAAAGTCTTAATGTTGAGTCTCCACCCAgatatggaaatggaaatatgTATCAACCGATGCCAGCGTATTTCCCAATGGGATCCAGGATTTGTGCTGGTTGCAATACCGAGATTGGTTATGGACGATATCTGAATTGCCTAAGTGCATTTTGGCATCCTGAATGCTTCCGCTGCCGTGCTTGCAACCTGCCCATATCTGATTATGAGTTTTCCACCTCTGGGAATTATCCTTACCATAAAGCATGCTATAAAGAAAACTACCATCCAAAATGTGATGTCTGCAAGCACTTTATTCCAACAAACCCTGCTGGTCTTATTGAATATAGGGCGCATCCTTTTTGGATCCAAAAATATTGCCCTTCCCACGAACATGATGGTACCCCACGCTGTTGCAGCTGTGAGCGTATGGAGCCACGAGAGACAGGATACATTGCTCTTAATGATGGTCGGAAACTATGCCTGGAGTGTCTGGACTCTGCTATCATGGATACAAGCGAATGCCAACCCCTTTATACTGACATACAAAAATTTTATGAAGGTCTGCATATGAGACTGGAACAGCAAGTTCCATTGCTCTTGGTTGAAAGACAAGCGTTGAATGAAGCTAGAGAGGGGGAGAAGAATGGCCACTATCACATGCCTGAGACCAGGGGACTCTGCCTTTCCGAAGAACAGACTATCAGCACTGTCTTGAGGCGACCTAGGTTTGGCACTGGAAACAGAGCAGTAGACATGAAGACACAGCCCTATAAACTGACTCGACGCTGTGATGTGACAGCAATTCTCATTTTGTATGGTCTTCCAAGGTTGCTTACTGGATCGATCCTAGCCCATGAAATGATGCATGCATGGCTGCGACTTAAAGGTAGTGGCTCATATGTGGTTGGAGTCTGA | 1146 | 0.4232 | MGWLSKIFKGSDHKISEGHYNANYREDTDFYLPSTSGDVWSENENEDIDRAIALSLAEENQKGKNVNDFNSQLEEDEQLARALQESLNVESPPRYGNGNMYQPMPAYFPMGSRICAGCNTEIGYGRYLNCLSAFWHPECFRCRACNLPISDYEFSTSGNYPYHKACYKENYHPKCDVCKHFIPTNPAGLIEYRAHPFWIQKYCPSHEHDGTPRCCSCERMEPRETGYIALNDGRKLCLECLDSAIMDTSECQPLYTDIQKFYEGLHMRLEQQVPLLLVERQALNEAREGEKNGHYHMPETRGLCLSEEQTISTVLRRPRFGTGNRAVDMKTQPYKLTRRCDVTAILILYGLPRLLTGSILAHEMMHAWLRLKGSGSYVVGV | 381 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto5g0270 | 381 | Gene3D | Cysteine Rich Protein | 109 | 189 | - | - | |
Sto5g0270 | 381 | PANTHER | PROTEIN DA1-LIKE | 1 | 376 | - | - | |
Sto5g0270 | 381 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 107 | 140 | - | - | |
Sto5g0270 | 381 | SMART | lim_4 | 114 | 166 | IPR001781 | - | |
Sto5g0270 | 381 | ProSiteProfiles | LIM domain profile. | 113 | 173 | IPR001781 | - | |
Sto5g0270 | 381 | Pfam | LIM domain | 115 | 169 | IPR001781 | - | |
Sto5g0270 | 381 | ProSitePatterns | LIM zinc-binding domain signature. | 115 | 149 | IPR001781 | - | |
Sto5g0270 | 381 | Pfam | Protein DA1 | 264 | 374 | IPR022087 | - | |
Sto5g0270 | 381 | CDD | LIM_DA1 | 115 | 167 | - | - | |
Sto5g0270 | 381 | Pfam | Ubiquitin interaction motif | 74 | 87 | IPR003903 | - | |
Sto5g0270 | 381 | Pfam | Ubiquitin interaction motif | 44 | 58 | IPR003903 | - | |
Sto5g0270 | 381 | Coils | Coil | 66 | 86 | - | - | |
Sto5g0270 | 381 | SMART | uim | 43 | 62 | IPR003903 | - | |
Sto5g0270 | 381 | SMART | uim | 74 | 93 | IPR003903 | - | |
Sto5g0270 | 381 | ProSiteProfiles | Ubiquitin-interacting motif (UIM) domain profile. | 74 | 93 | IPR003903 | - | |
Sto5g0270 | 381 | PANTHER | PROTEIN DA1-RELATED 2 | 1 | 376 | IPR045218 | - | |
Sto5g0270 | 381 | ProSiteProfiles | Ubiquitin-interacting motif (UIM) domain profile. | 43 | 62 | IPR003903 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto5g0270 | Sto-Chr5 | 1600817 | 1605036 | Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Sto5g0270 | DA1-like | 7.9e-56 | CL0126 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto5g0270 | - | - | lja:Lj5g3v0083000.1 | 679.863 |