Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0266 ATGGAAGTTTCCAGACCTCTCAAATCAGACTGTAGATTAAAGCACCGTCCTCTTACCCCTATTAGGACTTTAAGGGGTGTGTTATGTTTAGTGGTGTATATTTCTACAGCTTTTATGTTTTTAGCCTATTTTGCACCTGTGGGAGTTGTATTACTGCGGCTTTTCAGTATACGCTGTAGTAGGAAGGCAGTTTCTTTCCTCTTTGGACTTTGGTTAGCTCTATGGCCCTCTCTATTTGAAAAGTTAAACAAAACTAAAGTGATCTTTTCTGGAGATAGTGTTCCAAGGAAGGAACGTGTGTTACTTATTGCAAATCACAGAACTGAGGTTGATTGGATGTACTTGTGGAATCTTGCACTCCGAAAGGGAAGCCTAGGCTACATAAAATACATCCTTAAGAGCAGCTTAATGAAGCTGCCTATCTTTGGTTGGGGATTTCATGTTCTGGAGTTCATTGCAGTAGAGAGGAAGTGGGAGATAGATGAGCCAATATTGCACAGTAAGCTTTCAACATTAAAGGACCCTCAAGATCCTTTGTGGCTAGCTGTTTTTCCGGAAGGAACTGATTATACTGAAGAGAAGTGCAAAAAGAGTCAGAAATTTGCCACTGAAATTGGGCTTCCTGTGCTGACAAATGTTCTACTTCCAAAAACGAAAGGTTTTTATGCTTGCTTGGAAGTTCTACGAGACTCATTGGATGCAGGTTTGTCTTATATTTTTCTGGCCAGTCTGCCGAACTTTGTAATTCAACTACATGCAGTATATGACGTGACCATTGCATATAAGAATCAATGTCCTTCCTTTCTGGACAATGTGTTTGGGGTGGATCCTTCAGAAGTGCACATGCATGTTCGGCGTATCCCTATTGAGGGCATCCCAGCTTCTGAAACCAAAGCAGCTGCATGGCTAATGAATGCATTCCAGCTCAAGGACCAGTTGCTTTCTGATTTCAATGTGGAAGGGCAATTCCCTAATCAACTGAATGAAAAGGAACTTTCTACATTCAAGTGCCTACTTACTTTTACTGTGGTACTTTCTTTGACTGCCATGTTCGCTTATCTTACATTTTTTTCTGTCATTTGGTTCAAGGTGTATGTAGGCCTATCTTGTGCATATCTTACTATTGCAACGTGTTTCAAACTTCAATTGATACCACTTACTGACTATGTTAATGCATTCTGTTTTAGCAACAAACAAAAGACTGGATAG 1209 0.4028 MEVSRPLKSDCRLKHRPLTPIRTLRGVLCLVVYISTAFMFLAYFAPVGVVLLRLFSIRCSRKAVSFLFGLWLALWPSLFEKLNKTKVIFSGDSVPRKERVLLIANHRTEVDWMYLWNLALRKGSLGYIKYILKSSLMKLPIFGWGFHVLEFIAVERKWEIDEPILHSKLSTLKDPQDPLWLAVFPEGTDYTEEKCKKSQKFATEIGLPVLTNVLLPKTKGFYACLEVLRDSLDAGLSYIFLASLPNFVIQLHAVYDVTIAYKNQCPSFLDNVFGVDPSEVHMHVRRIPIEGIPASETKAAAWLMNAFQLKDQLLSDFNVEGQFPNQLNEKELSTFKCLLTFTVVLSLTAMFAYLTFFSVIWFKVYVGLSCAYLTIATCFKLQLIPLTDYVNAFCFSNKQKTG 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0266 402 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 38 194 - -
Sto5g0266 402 SMART plsc_2 100 222 IPR002123 GO:0016746
Sto5g0266 402 Pfam Acyltransferase C-terminus 273 342 IPR032098 -
Sto5g0266 402 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5-RELATED 1 391 - -
Sto5g0266 402 Pfam Acyltransferase 88 211 IPR002123 GO:0016746
Sto5g0266 402 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 1 391 - -
Sto5g0266 402 CDD LPLAT_LCLAT1-like 78 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0266 Sto-Chr5 1580812 1582359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0266 1 385 Miscellaneous Gene Families AT1G75020 65.455 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0266 K13513 - gmx:100808657 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0266 5 1580812 1582359 Sto5g0266 5 1580812 1582359 ECH