Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0249 ATGTACCAGGACATCGATATCGTTGAGAATGGTAGAATCGGAGTGGTGAGAGAAACGAATAAAGTTGGCGGCGGAGCTTTTGAGAGTGAGGGAACCAGTAAACATGGACCAAAGAGCCAAGAGGAGAATCGCTGTTATGACCCAGAACTTGTAGTGTCTCTTGCCGACAACTACATCTTCGGAGCTCTCCCTCTGACTCTTTGTCATGCAAAGTCTTATAGCATCTCCTGTGagaataattcaatttcaaatacaAATTTTCCGAACATGGCTAAACGCTTCAAACTCAAGTTCACAATGCCCTCGTTTCGATTGTGTCGCTCCAAAAGGCTTTCAAATTTCCCGGGAAATCCAGTTCCCGCCATATACCGTCTTTCTCCCGTGAACCCAAAAGTTATAGATATTGCGTACCCAAACCAGCCGGCACCACCACCGTCAACACCAGAAAACCGTTGCCGAACCGGACCGTCCAATAAAAACCGCCTTCCCTACGCCAATTCTCCAGATAGCGTTTACTGTGAATCCAACTTCTGCAAAATCGGCGGTGATAAGGGCAAAAAAGTAAAATCCGGAAACCGGAGAAGTACGACGAGCGGTTCGTCCAAGAAAAGTAACTTTCTCGTCGACAAAGATGAAGAAAGCGAGAGTCTAATCTCTTGCTTGACCAgcttctccgacgagttttaTAACGAGCAAGTCCACGAGAGAGAAATTAGTACTAGGCACGTAATTAGCAACAGAAAGAAGGTTCAGACTCAGAGACGGAGATTTCAAGGATCGGAAAGAGGAGAGATCAGTAcgacgaggaagaagaagacggAGGCTCCGAGTTCGTCGAGGAGATCGGTGCCGCGGCGTATGGCGGAGGGGAAGGTGAAGGAGAGCTTCGCGGTGGTGAAGAGATCGAATGATCCGTACGAGGACTTCAAGAAATCGATGCTGGAGATGATAATGGAGATGGAGATGTTTGAGGAAAATGAATTGGAGCAACTTCTGCAGTGTTTTCTGACGCTGAATTCGCGAGACTATCATGGTGTAATAGCGCGAGCTTTCATGGAAATCTGGCAAGAACTGATCTGTGAACCTGATCGCGTCGATAATAACGAATCTCCTATCCTAAGTACAGTACAGGCTTTGAAGCGTGAACACTGA 1152 0.4462 MYQDIDIVENGRIGVVRETNKVGGGAFESEGTSKHGPKSQEENRCYDPELVVSLADNYIFGALPLTLCHAKSYSISCENNSISNTNFPNMAKRFKLKFTMPSFRLCRSKRLSNFPGNPVPAIYRLSPVNPKVIDIAYPNQPAPPPSTPENRCRTGPSNKNRLPYANSPDSVYCESNFCKIGGDKGKKVKSGNRRSTTSGSSKKSNFLVDKDEESESLISCLTSFSDEFYNEQVHEREISTRHVISNRKKVQTQRRRFQGSERGEISTTRKKKTEAPSSSRRSVPRRMAEGKVKESFAVVKRSNDPYEDFKKSMLEMIMEMEMFEENELEQLLQCFLTLNSRDYHGVIARAFMEIWQELICEPDRVDNNESPILSTVQALKREH 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0249 383 MobiDBLite consensus disorder prediction 244 289 - -
Sto5g0249 383 MobiDBLite consensus disorder prediction 184 207 - -
Sto5g0249 383 MobiDBLite consensus disorder prediction 151 165 - -
Sto5g0249 383 Pfam Transcriptional repressor, ovate 302 358 IPR006458 -
Sto5g0249 383 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 296 358 IPR006458 -
Sto5g0249 383 MobiDBLite consensus disorder prediction 254 289 - -
Sto5g0249 383 PANTHER TRANSCRIPTION REPRESSOR OFP7-LIKE 90 361 - -
Sto5g0249 383 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 90 361 IPR038933 GO:0045892
Sto5g0249 383 MobiDBLite consensus disorder prediction 139 165 - -
Sto5g0249 383 ProSiteProfiles OVATE domain profile. 298 357 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0249 Sto-Chr5 1447397 1451049 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Sto5g0249 Ovate 4.9e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0249 - - aip:107608440 217.624