Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0244 ATGTCCTTTACTCCTAATCTTGACTCCATCTATTCATTATTCATCCCTGACTATGCTTTTCTCCAagAGCAGTTTTCAGTTATCATGTTTCATCCCCCAAAGAGTTCTCAGCACGACCACCAAAGCAATGAGCTTTACACTGAATCCAAGATTGAAGAGCTGAAGGCTGCAATAGGACCCTTATCTGGACGCAGCTTGAAGTACTGCACTGATGCTTGTTTGAGAGGTTATCTCCAAGTTCAGAATTGGAATCATGAGGTTGCAAAGCAAGCAGAGACAGGGATAATGTACAGAGCAAGTTTTCATGACCGACAAGGACGGACAGTTCTTGTAATGAAGCCTGGCATGCCgAGGAAATCTTCAATGGAAGATGGGATTCGGCTCCAAGTGTACCTTACGGAAAATGCTGTGCTTAACTTCCCAGAAGGCCAACAACAAATGACATGGCTCGTAGATTTCAGTGAATTTTCATTGACAAAGAGTGTGTCCACTAAATTAGCCAAACAAAGCATTCACATTCTGCAAAGCCACTATCCCGACAGACTAGCCATGGCTATTGTATACAATCCTCCTCGCATTTTTGAAGCCTTTTGGAAGATAGTCAAGTGTTTCTTGGATAACAAGACATTTGAGAAGGTGAAGTTCGTGTACCCCAACAATAAAGACAGCGTGGACTTCATGAACTCCTATTTTGATTTCGAAAGTCTTCCCACACAATTCGGAGGAAATGCCACATTCAAGTATGATCATAACCACTTTTCTAGATTAATGGCTCACGACGATTTCAAAACCGCTGCCTTTTGGGCAACTGATGATGACAACCTCTGA 828 0.4227 MSFTPNLDSIYSLFIPDYAFLQEQFSVIMFHPPKSSQHDHQSNELYTESKIEELKAAIGPLSGRSLKYCTDACLRGYLQVQNWNHEVAKQAETGIMYRASFHDRQGRTVLVMKPGMPRKSSMEDGIRLQVYLTENAVLNFPEGQQQMTWLVDFSEFSLTKSVSTKLAKQSIHILQSHYPDRLAMAIVYNPPRIFEAFWKIVKCFLDNKTFEKVKFVYPNNKDSVDFMNSYFDFESLPTQFGGNATFKYDHNHFSRLMAHDDFKTAAFWATDDDNL 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0244 275 PANTHER DIVERGENT CRAL/TRIO DOMAIN PROTEIN 34 89 - -
Sto5g0244 275 PANTHER DIVERGENT CRAL/TRIO DOMAIN PROTEIN 85 273 - -
Sto5g0244 275 SUPERFAMILY CRAL/TRIO domain 86 259 IPR036865 -
Sto5g0244 275 SMART sec14_4 90 245 IPR001251 -
Sto5g0244 275 CDD SEC14 102 243 IPR001251 -
Sto5g0244 275 Pfam CRAL/TRIO domain 94 242 IPR001251 -
Sto5g0244 275 PANTHER GH16843P 85 273 - -
Sto5g0244 275 PANTHER GH16843P 34 89 - -
Sto5g0244 275 Gene3D - 84 268 IPR036865 -
Sto5g0244 275 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 84 248 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0244 Sto-Chr5 1419396 1421358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0244 150 237 Acyl Lipid Metabolism Gene Families AT1G55840 30.682 4.81e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0244 - - aprc:113847293 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0244 5 1419396 1421358 Sto5g0244 5 1419396 1421358 ECH