Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0232 ATGGCGTCGTCAAGCTGTAGATCTAGTTGGACAGCAAAGCAAAACAAAATGTTTGAGAATGGTTTGGCCATATACGATAAGGACAGCCCTGATCGGTGGGAGAAGCTGGCAAGGGCAGTGGGAGGGAAGACAGTGGAAGAAGTGAAGAGGCATTATGAGGACCTTGTTGAAGACCTGAGGCAGATCGAGGAAGGACAAGTGCCCTTGCCCAattaccctaaccctaaccctatacccttatCCTACCATTACATTCATCAACAACAAAGGATGAAGCTTTTGAAACTTTAG 291 0.4227 MASSSCRSSWTAKQNKMFENGLAIYDKDSPDRWEKLARAVGGKTVEEVKRHYEDLVEDLRQIEEGQVPLPNYPNPNPIPLSYHYIHQQQRMKLLKL 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0232 96 CDD SANT 9 56 IPR001005 -
Sto5g0232 96 SMART sant 6 58 IPR001005 -
Sto5g0232 96 Coils Coil 45 65 - -
Sto5g0232 96 ProSiteProfiles Myb-like domain profile. 7 56 IPR001005 -
Sto5g0232 96 Gene3D - 1 69 - -
Sto5g0232 96 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 96 IPR044636 GO:0003700
Sto5g0232 96 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 96 - -
Sto5g0232 96 SUPERFAMILY Homeodomain-like 9 63 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0232 Sto-Chr5 1357949 1358384 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto5g0232 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0232 - - pvy:116119438 120.938
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0232 5 1357949 1358384 Sto5g0232 5 1357949 1358384 ECH