Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0178 ATGGCGGATGGAAGCTGTTGTCCGACGATGGATCTGCTACGGTCGGAGCCAATGCAACTTGTGCAACTTATCATTCCGACTGAATCAGCTTACCGAGCCATCTCTTACCTCGGCGATCTTGGCCTCTTCCAGTTCAAAGATCTAAATGCAGAGAAAAGCCCATTCCAACGAACATATGCTTCTCAGATTAAAAGATGTGGGGAAATGGCACGTAAGCTTCGGTTATTTAGGGAACAAATGACAAAGGCCGGAATATCACCCTCAACAAGGTCAACAGGAGACAATGAAGTTGATTTGGATAATTTGGAGGTTAAACTTGCAGAACTTGAAGTGGAGCTACTTGAGATGAATATGAATAATGAGAAGTTACAACACACTTACAGTGAGCTACTAGAGTATGAACTCGTTCTACAGAAGGCTGGTGAATTTTTCTCTTCAGCTAAGAATAGTGCTGCCGCTCACCAAAGAGAGCTGGAAGTCCAGAACACTGTTGAAGGCTCTATTAACAATCCATTATTACTGGAACAAGAGATGACAACAGACCCATCAAAGCAAATTAAGCTGGGGTTTATATGTGGTCTTGTTCCGAGAGAAAAATCAATGGCATTTGAAAGAATATTATTTCGTGCTACTAGGGGTAATGTGTTTCTGAAGCAAACCATGGTTGAACATCCTGTTCTTGATCCTTTGTCAGGAGAGAAGGTTGATAAAAATGTATTTGTAATATATTATTCTGGAGAGAGAGCAGaaagtaaaattttgaaaatatgtgACGCCTTTGGAGCAAATCGTTATCCATTCACTGATGATTTGGGCAAACAATTTCAGATGACTACAGAGGTGTCAAGAAGACTTTCTGAAATGAAGACTACCATTGATGTTGGATTGTTGCACCGGAGCAATCTTTTGCAGACAATTGGATATTATTTTGAGCAGTGGAGCCTTCTGGTGAAGAAGCAAAAATCCATTTTCCACACTCTAAATATGCTTAGCATTGATGTGACAAAGAAATGTCTTGTGGCAGAAGGTTGGTGTCCTGTTTTTGCAACAAATCAGATTCAAGTTGCATTGCAGCGGGCAACCATGGACAGTAACTCACAAGTTGGGGTGATATTTCAAGTTTTACAAACAAAGGAATCACCGCCGACGTATTTCCGCACAAATAAATTTACTTCTGCCTTCCAAGAAATTGTCGATGCCTATGGAGTTGCCAAGTACCGGGAAGCAAACCCTGGTGTATACACAATTATTACATTTCCATTCCTCTTTGCTGTGATGTTTGGTGATTGGGGCCATGGTATATGCTTATTGCTAGCAACTTTATATTTCATAATCAGAGAGAAGAAATTTTCTAGCCAGAAACTTGGGGATATAATAGAAATGACTTTTGGTGGCCGATATGTTATTATGATGATGGCACTGTTCTCAATATACACAGGATTAATATACAATGAGTTTTTCTCTGTCCCATTTGAACTATTTGCGCCATCTGCCTATGGATGCCGTGATCTTTCATGCAGAGATGCTTCTACAATAGGTTTAATAAAGGTGCATGACACTTATCCATTTGGTGTGGATCCCAAGTGGCATGGTACACGGAGTGAATTGCCATTTCTCAACTCTTTGAAGATGAAGATGTCAATCATACTGGGAGTAGTCCAAATGAATCTTGGAATTGTATTGAGCTACTATAATGCAAAATACTTCGGAAACGAGATAAATATCTGGTACCAGTTTGTTCCccaaattatattcttaaacAGTTTGTTTGGCTACCTTTCGCTCCTCATAATTGTTAAATGGTGCACTGGATCACAAGCTGACCTGTATCATGTGATGATTTACATGTTCCTTAGTCCAACTGATGATTTGGGCGAAAACCAGCTCTTTTTTGGCCAGAAGTTCCTTCAACTGGTGTTACTATTGTTGGCACTTGTTGCTGTACCATGGATGCTGTTTCCAAAGCCCTTTCTCCTCAAGAAGCAGCACCAAGAAAGGCATCAAGGTCAATCTTACTCTCTTCTTGACAGCAGTGATGACCCTCTTGAATCAGAGCCACATAGTATTCCCGACGGCCATGAGGAGTTTGAGTTCAGTGAGGTTTTTGTCCACCAACTTATACATACAATCGAGTTTGTGCTTGGGGCAGTGTCTAATACAGCTTCATATCTACGTTTGTGGGCCCTCAGCCTGGCACATTCAGAGTTGTCAAGTGTGTTTTATGACAAAGTTCTACTTCTGGCCTGGGGGTTCAACAATATCACTGTTCTCATTGTCGGCATTATTGTTTTCATATGCGCTACTATTGGTGTGCTACTGGTTATGGAAACTCTGAGTGCTTTCTTGCATGCATTGAGGCTTCACTGGGTAGAGTTCCAGAATAAGTTTTATGAGGGAGATGGTTACAAGTTTTGCCCATTTTCATTTGCTTTACTTAATGACGAGGATGAAATATAG 2457 0.4029 MADGSCCPTMDLLRSEPMQLVQLIIPTESAYRAISYLGDLGLFQFKDLNAEKSPFQRTYASQIKRCGEMARKLRLFREQMTKAGISPSTRSTGDNEVDLDNLEVKLAELEVELLEMNMNNEKLQHTYSELLEYELVLQKAGEFFSSAKNSAAAHQRELEVQNTVEGSINNPLLLEQEMTTDPSKQIKLGFICGLVPREKSMAFERILFRATRGNVFLKQTMVEHPVLDPLSGEKVDKNVFVIYYSGERAESKILKICDAFGANRYPFTDDLGKQFQMTTEVSRRLSEMKTTIDVGLLHRSNLLQTIGYYFEQWSLLVKKQKSIFHTLNMLSIDVTKKCLVAEGWCPVFATNQIQVALQRATMDSNSQVGVIFQVLQTKESPPTYFRTNKFTSAFQEIVDAYGVAKYREANPGVYTIITFPFLFAVMFGDWGHGICLLLATLYFIIREKKFSSQKLGDIIEMTFGGRYVIMMMALFSIYTGLIYNEFFSVPFELFAPSAYGCRDLSCRDASTIGLIKVHDTYPFGVDPKWHGTRSELPFLNSLKMKMSIILGVVQMNLGIVLSYYNAKYFGNEINIWYQFVPQIIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFFGQKFLQLVLLLLALVAVPWMLFPKPFLLKKQHQERHQGQSYSLLDSSDDPLESEPHSIPDGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNNITVLIVGIIVFICATIGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFCPFSFALLNDEDEI 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0178 818 PIRSF ATP6V0A1 8 818 IPR026028 GO:0000220|GO:0046961
Sto5g0178 818 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 4 817 - -
Sto5g0178 818 Coils Coil 99 126 - -
Sto5g0178 818 PANTHER VACUOLAR PROTON ATPASES 4 817 IPR002490 GO:0033179|GO:0046961|GO:1902600
Sto5g0178 818 Pfam V-type ATPase 116kDa subunit family 36 809 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0178 Sto-Chr5 1046467 1052979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0178 10 817 Primary Pumps ATPases(2) AT4G39080 75.525 0.0 1277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0178 K02154 - jre:109008274 1350.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0178 5 1046467 1052979 Sto5g0178 5 1046467 1052979 ECH