Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0159 ATGGGAGCAACAGCGAAGAACAGCGATAGATACCAATACGATGTCAGGATAGTTAACATAGAAAAGGTGGCACTCCCTTGGTTTCTTCAAATGAAATCTGTTTCTTATATAACAAATGATATTACTGTGGTTGCAAGTTGCTCTTTGCAAATGTCTGTGTATTGTGAGAATTTGAAAATCAGGCGACTTTATGTTTTCTTCTGCTATTATGAAGAGGAATGTCCTTCACAAGTTGGGTTAAATGCTCAAGATCACCTCCAAGCAAAGGCGTCATTACTGATGCATCCAGGAGGAGCAGGTTCTGATGACACTCTACCTCCTGGCTTTGAGGGAACTCAACCCTCCAGTCATATGCAGATTAAGTTGTCTCAAATTCCTGTGATTAGATGGACTAATCCGCTTAAGATTGTGCTGAATGTCACATGGCAAGTGGTGGCTGGGGAAGAAAGCAAAGAGGTAGAGGATCAAAATCAGAGGGAGATGAAAGTACTTGAGGCTATTTATCCCCGCCCATCTTCCATTCCTCCAAACCCCTCTGTCTCAATGGATGTAGAAGACTGCCATTGCATTGATGATCAAACTGCTTCGATACCAATTACAGGCATTGAAGATGAAGAAGCAGCAGTAGATGGCTCATCTGAAGTTCCTCCAAGTTCACAGCCTCTTTCATTGCCTCCTGGAGCACCCAAGGGTTTGAACTCTCTTTCAAATATGCAATCACCTCATGTAGAATCTGACATTGCTGCTGCTTCTGCTGCATCCGTTGCTTTGACCAATATCATGAAGAGCAATGAACATGGAAATATGATTGACCATGAATTGCTAAATAAAATTCTCAGCAATCCAGAAGTGATCGAGAAGTTGGTTAGAGATTATGGAACAACAAATAACATGCAAAATGCATTCAATGCAAGGTCATCTCCGGTGGCATTTTCACAGCTACATATTCCTGTGAATCAAACTGAAACCACTACACATTCATTAGGTGCTTTTTCAGCCAGCCCATCCTATCCTTCCCCGAGTGGGTGTCGAGTGGGACCTGTTGCACCTCCTGCAGTGGGTCCAATTAGTGTTGGAGCTCATCCAGCGAAGGATGTGAACTATTATAAGAGCTTAATTCAGCAACATGGAGGAGAAACTCAAGAGAGTCTTCCTTACATGGGCAACATTCAGCAACCCCTAGGAAACCAGGAAACAACAACTCACAATTCTAGATCAAGGGAACCAAAACCTAAGATAATGAAGCCTTGTATCTATTTCAATAGTCCTAAAGGATGTCGGAATGGAGCTAACTGTTCATACCAACATGATGCAGCATTCCAGCCACGGACTAGTGGTGTGCCTGGGATACAAAGTTCGAAGAGAACCAAACTGGATAGCGAAATAAGCAGTTGGCTCCTTTTTCTTCCTTTGATTGAGAATATGAAGAAAATGCtgcttttcttcattttctccaaAGCTGAACTTGCCAGCATCCACCTCTGCGGTCAGATCCCTGAGACCGAACAAATGTTCCGACAGCCTTGTCCTGTCATTATCCCTGACGACGATCTGAGCCAACCCGCTCCCGGAGTTGAAGTCTTAATTAGAGTAGCATTGATCGATGCTATCAATGAAGTGGCATCTTGA 1629 0.4285 MGATAKNSDRYQYDVRIVNIEKVALPWFLQMKSVSYITNDITVVASCSLQMSVYCENLKIRRLYVFFCYYEEECPSQVGLNAQDHLQAKASLLMHPGGAGSDDTLPPGFEGTQPSSHMQIKLSQIPVIRWTNPLKIVLNVTWQVVAGEESKEVEDQNQREMKVLEAIYPRPSSIPPNPSVSMDVEDCHCIDDQTASIPITGIEDEEAAVDGSSEVPPSSQPLSLPPGAPKGLNSLSNMQSPHVESDIAAASAASVALTNIMKSNEHGNMIDHELLNKILSNPEVIEKLVRDYGTTNNMQNAFNARSSPVAFSQLHIPVNQTETTTHSLGAFSASPSYPSPSGCRVGPVAPPAVGPISVGAHPAKDVNYYKSLIQQHGGETQESLPYMGNIQQPLGNQETTTHNSRSREPKPKIMKPCIYFNSPKGCRNGANCSYQHDAAFQPRTSGVPGIQSSKRTKLDSEISSWLLFLPLIENMKKMLLFFIFSKAELASIHLCGQIPETEQMFRQPCPVIIPDDDLSQPAPGVEVLIRVALIDAINEVAS 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0159 542 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6 71 460 - -
Sto5g0159 542 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 71 460 - -
Sto5g0159 542 ProSiteProfiles Zinc finger C3H1-type profile. 411 439 IPR000571 GO:0046872
Sto5g0159 542 MobiDBLite consensus disorder prediction 207 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0159 Sto-Chr5 910209 916103 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Sto5g0159 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0159 - - adu:107460053 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0159 5 910209 916103 Sto5g0159 5 910209 916103 ECH