Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0148 ATGGTTAATGGAGTGAAAGGCCAAGATTGGAAATTGCGGGGATGCTACTTGTTAAATCTTAGAGTAGGTCAAACAGCAGTTCTGAAGCAGATTGTGAAGAGATGCTCAAGTCTAGGGAAGAAACAAGGGTATGATGAAGAAGGGCTGCCATGGGACGTGCCCAAGGGTCACTTCGTTGTATATGTTGGAGAAAACAGAAGCAGATACATTGTGCCAATCTCCTTTCTCACTCGCCCGGAGTTCCAAAGCTTGCTTCATCAAGCAGCAGAAGAATTTGGGTTTGATCACGACGGGGGTCTCACCATCCCTTGTGAACAAGATGTTTTTGAGTCTCTCACCTCCAATCTCAGATCATTTTGA 360 0.4528 MVNGVKGQDWKLRGCYLLNLRVGQTAVLKQIVKRCSSLGKKQGYDEEGLPWDVPKGHFVVYVGENRSRYIVPISFLTRPEFQSLLHQAAEEFGFDHDGGLTIPCEQDVFESLTSNLRSF 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0148 119 Pfam Auxin responsive protein 47 114 IPR003676 GO:0009733
Sto5g0148 119 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 14 117 IPR003676 GO:0009733
Sto5g0148 119 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 14 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0148 Sto-Chr5 852850 853612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0148 24 112 Calmodulin-binding Proteins AT3G43120 42.105 8.31e-20 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0148 K14488 - tcc:18591528 172.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0148 5 852850 853612 Sto5g0148 5 852850 853612 ECH