LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto5g0074	ATGCTGTCATATGCACGCCACGCGCGCGAAATTGTGAGTTCACGACCCCTTTTTGCTATTCCCCGAATAACACGCCGTTTTCAAAATCTCGGTGTATTAAGCTCCTACGGCTTCCATTGTTTGAGTCTAAGCAAACGCACACCTAGACCGCGTTTCCTATTATTCAAATCTCACCCTCCTCTGTTTTTCTCTGCTTTTACTTCTCCCTCAACACCTACCATGGGTTCCCTCCGTGCCCTAGATGTGCCTCCGCAATATCCCGTTGCTCGCAGAGACGACTCCGTCGTCGATGACTTCCACGGCGTTAACATTGCCGACCCTTATCGATGgcTTGAGGATCCTGATGCGGAAGAAGTCAAAGAGTTTGTACAGAAGCAGGTTAAATTGACGGATTCCGTACTTCAGATTTGCGATAGTAGGGACAAGCTTCGTGAAAAGATCACGAAGCTCTTTGACCATCCTCGTTATGAAGCTCCTTTTAGGCGAGCAAATAAGTACTTTTACTATCATAACACCGGCCTTCAGCCGCAAAGCGTTCTTTATGTGCAGGATAGTTTGGATGGAGAACCTGTGGTTTTGCTTAACCCCAATGCCCTCAGTGAAGATGGAACGGTGTCATTGAGCACACTTTCTGTGAGCGAGGATGCAAAGTATTTGGCTTATGGCCTTAGTTCAAGTGGTAGCGATTGGGTGACAGTAAAAGTAATGCGTATTGAGGACAAGAATGTTGAGCCTGATAATTTATCATGGGTCAAGTTTTCCTCTATAAGTTGGACACATGATAGCAAAGGTTTCTTTTACAGCCGCTATCCAACACCCAAAGAAGGAGAAGTAATAGATGCTGGGACTGAGACAAATGCTAACCTTTATCATGAGCTCTATTATCATTTTTTGGGTACAGATCAATTAGAAGATATTCTATGCTGGAGAGATCctgaaaaccctaaatataTGTTTGGAGCAAGTGTTACTGATGACGGAAAGTATGTCCTTCTTTATATTGAAGAAGGGTGTGATCCAGCTAACAAACTTTACTACTGTGACATGACTGCTCTTCCTAATGGACtggaaagttttcgaaatgaaAATTCCCTACTCCCATTTGTCAAGCTTATTGATAACTTCGATGCACAATATCAAGCCATTGCAAATGATGACACTGTATTTACTTTTTTGACGAATAAAGATGCTCCAAAATATAAACTAGTTCGAGTCGATTTGAAAGAACCAACTGCTTGGACTGATGTTCTCCCAGAATCAGAAAAAGATGTACTTGAGTCAGCAATCCCTGTAAATGGAAACCAAATGATTGTGAGTTACTTGAGCGATGTGAAGTATGTTCTACAAGTGAGAGACTTAAAAACAGGTTCCTTGCACCATCAATTACCAATTGACATTGGCTCAGTTTTTGGAATTTCTGCACGGCGTGAAGATAGTATGGTTTTCATTGGCTTCACAAGCTTTTTAACTCCTGGTATCATATATCAGTGCAATTTGAAAGATGAGGTTCCTGATATGAAGATATTTCGTGAAATTACTGTCCCTGGGTTCAATAGGTCCGAGTTTCACGTCAATCAGGTTTTCGTGCCTAGCAAGGATGGTACCAAGATCCCAGCATTCATTGttgccaaaaaaaatattgttttggaTGGCTCACACCCTTGTTTATTATACGGATATGGTGGTTTTAACATCAGTCTTACACCATCTTTCAGTGTCAGTCGCATTGTACTCACAAGACATCTAGGTGTTGTTTTCTGCATAGCAAATTTACGTGGTGGTGGAGAATACGGGGAGGAATGGCATAAAGCAGGCTCCCTTGCAAACAAGCAGAATTGTTTTGATGATTTCATTTCTGTAGCTGAATACCTTGTATCTGCTGGTTATACCCAATCCAATAAGTTATGCATTGAAGGTGGAAGCAACGGTGGACTTCTTGTTGGGGCTTGCATAAATCAGAGACCTGATCTTTTTGGCTGCGCATTGGCTCATGTGGGTGTTATGGACATGTTACGATTCCACAAGTTTACTATAGGTCATGCTTGGACCTCGGATTATGGTTGCTCAGACAAGGAGGAAGAATTTCATTGGCTAATAAAGTACTCGCCATTGCATAATGTGCGAAGACCATGGGAAAAGTATCCTGACAAGTCAATTCAGTACCCACCAACCATGCTGTTGACTGCTGATCATGATGATCGTGTTGTGCCACTACACTCTTTGAAGTTACTGGCGACTATGCAGTATGTCCTCTGTACAAGCTTGGAGAAAAGCCCTCAGACAAACCCTATTATTGGTCGCATTGAATGTAAGGCTGGTCATGGAGCGGGTCGACCAACGCAGAAAATGATTGATGAGGCTGCTGACCGCTACGGTTTCATGGCTAAAATGGTAGACGCACATTGGACTGAATAG	2415	0.4182	MLSYARHAREIVSSRPLFAIPRITRRFQNLGVLSSYGFHCLSLSKRTPRPRFLLFKSHPPLFFSAFTSPSTPTMGSLRALDVPPQYPVARRDDSVVDDFHGVNIADPYRWLEDPDAEEVKEFVQKQVKLTDSVLQICDSRDKLREKITKLFDHPRYEAPFRRANKYFYYHNTGLQPQSVLYVQDSLDGEPVVLLNPNALSEDGTVSLSTLSVSEDAKYLAYGLSSSGSDWVTVKVMRIEDKNVEPDNLSWVKFSSISWTHDSKGFFYSRYPTPKEGEVIDAGTETNANLYHELYYHFLGTDQLEDILCWRDPENPKYMFGASVTDDGKYVLLYIEEGCDPANKLYYCDMTALPNGLESFRNENSLLPFVKLIDNFDAQYQAIANDDTVFTFLTNKDAPKYKLVRVDLKEPTAWTDVLPESEKDVLESAIPVNGNQMIVSYLSDVKYVLQVRDLKTGSLHHQLPIDIGSVFGISARREDSMVFIGFTSFLTPGIIYQCNLKDEVPDMKIFREITVPGFNRSEFHVNQVFVPSKDGTKIPAFIVAKKNIVLDGSHPCLLYGYGGFNISLTPSFSVSRIVLTRHLGVVFCIANLRGGGEYGEEWHKAGSLANKQNCFDDFISVAEYLVSAGYTQSNKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTSDYGCSDKEEEFHWLIKYSPLHNVRRPWEKYPDKSIQYPPTMLLTADHDDRVVPLHSLKLLATMQYVLCTSLEKSPQTNPIIGRIECKAGHGAGRPTQKMIDEAADRYGFMAKMVDAHWTE	804

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Sto5g0074	804	PRINTS	Prolyl oligopeptidase serine protease (S9A) signature	554	572	IPR002470	GO:0004252\|GO:0006508
Sto5g0074	804	PRINTS	Prolyl oligopeptidase serine protease (S9A) signature	581	605	IPR002470	GO:0004252\|GO:0006508
Sto5g0074	804	PRINTS	Prolyl oligopeptidase serine protease (S9A) signature	609	628	IPR002470	GO:0004252\|GO:0006508
Sto5g0074	804	PRINTS	Prolyl oligopeptidase serine protease (S9A) signature	639	659	IPR002470	GO:0004252\|GO:0006508
Sto5g0074	804	PRINTS	Prolyl oligopeptidase serine protease (S9A) signature	721	743	IPR002470	GO:0004252\|GO:0006508
Sto5g0074	804	Pfam	Prolyl oligopeptidase, N-terminal beta-propeller domain	87	502	IPR023302	GO:0004252
Sto5g0074	804	Pfam	Prolyl oligopeptidase family	569	799	IPR001375	GO:0006508\|GO:0008236
Sto5g0074	804	PANTHER	PROLYL OLIGOPEPTIDASE-LIKE PROTEIN	70	804	-	-
Sto5g0074	804	Gene3D	alpha/beta hydrolase	95	794	IPR029058	-
Sto5g0074	804	SUPERFAMILY	Peptidase/esterase 'gauge' domain	83	512	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto5g0074	Sto-Chr5	467548	472713	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto5g0074	546	748	Carbohydrate Esterase	AT5G36210	26.341	4.38e-06	48.5

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto5g0074	K01322		-	qsu:112006748	1337.01

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto5g0074	5	467548	472713	Sto5g0074	5	467548	472713	ECH

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