Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0073 ATGGTGAGTTCCATTCTTGAAGGGCCAACTGATTCGGACAGAGATATAGTGGAGAGTTGTTTTAGAAAATGTGAACACTTGAGTAGTTCCAAGGATTTCAAATGTGACCCTAGACTTTGCAGCCTTTGCTTAGGGATCCTGCAGTTCAAATTTTTTGATGAAAGAAAGACTCTGGTGAAAAGAGATACTCCTGATGACATGGCTGTCAGGATTGCTGACATTGTTAAAGAGGAAGGCCATCAGATTGACAGCTTTTCCCTTGAAGTTTCAATACCATCTATTATCCTTGAAAATGAATGCTCAATTCAAAATGACGTTTTGCAGGACTGCAAATCAAGTATGAGCTCTTTCCGCATCCGATTGATATACAATCATACAAATTCATCGAAAGAGGTTGAGAAAGCTTTGGATTGTAATAACAGTTGCAAGAGAAGGAAAACAGGCATGGACGACAGTGTGGATGCTGCCAATGACTCCACAGTTTCTTGCGGTGAATGCTCAGATTCTACCATAGGTGAATCCGATCTAGTTGGAGAAAAGCCATTCAACAGTCTGGCAAATGAACCTTGCCATTTTTCAGTCTATTGCTACAGAACACCTGTCTGTTTTGGTGGAAGATACCTGAAGTATTCACGGAATGTGAGTCAAACACGCTGGATCATTGATGATGAGAGAATGGGGGAAACATCTGTTGAGGAAATAATTGGAGGGAACATCCTTCAAATGTGCCATGGTGATAATTATAAGTTTCATGCTGCTGGCAGAGAAGATATTGATGTCCGGATGTTGGGTACAGGAAGGCCATTCCTTGTTGAGGTGCAAAATGTGCGACATATCCCATCTGAGCTGTTGGTTAGagtgaaaaatttaaaattggttGGTAGTCAAGGTTGGAACCTTATGCGTGAAGGAGAGGCGGAGAAACAGAAGCAATATGCTGCTTTAGTGTGGATTTCTCGTCCTGTGAAAGATGAAGATTTGCAATGTCTGTCTTCGCTCAAGGATGTGAAAATTTTGCAGAGGACCCCAATAAGAGTGCTACACCGTCGCAGTCCTCTTGAGCGTGAAAAAATTATTCATTGgaTGAAAATAGAAACGATAGCTGGAAGCTCCCAGTATTTTCTTTTGCATCTATGTACACAGGCTGGGACGTACATAAAGGAATTTGTTCACGGAGATTTTGGACGTACCCATCCTAGTATCGGATCAATTTTGGGTTGTAGAGCTGAAATTTTACAGCTTGATGTCACAAATGTCAAAATGGACTGTTTCCTGAGTGAATAG 1284 0.4089 MVSSILEGPTDSDRDIVESCFRKCEHLSSSKDFKCDPRLCSLCLGILQFKFFDERKTLVKRDTPDDMAVRIADIVKEEGHQIDSFSLEVSIPSIILENECSIQNDVLQDCKSSMSSFRIRLIYNHTNSSKEVEKALDCNNSCKRRKTGMDDSVDAANDSTVSCGECSDSTIGESDLVGEKPFNSLANEPCHFSVYCYRTPVCFGGRYLKYSRNVSQTRWIIDDERMGETSVEEIIGGNILQMCHGDNYKFHAAGREDIDVRMLGTGRPFLVEVQNVRHIPSELLVRVKNLKLVGSQGWNLMREGEAEKQKQYAALVWISRPVKDEDLQCLSSLKDVKILQRTPIRVLHRRSPLEREKIIHWMKIETIAGSSQYFLLHLCTQAGTYIKEFVHGDFGRTHPSIGSILGCRAEILQLDVTNVKMDCFLSE 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0073 427 Gene3D - 201 309 - -
Sto5g0073 427 Gene3D - 310 420 - -
Sto5g0073 427 PANTHER UNCHARACTERIZED 29 102 IPR039894 -
Sto5g0073 427 PANTHER UNCHARACTERIZED 110 421 IPR039894 -
Sto5g0073 427 PANTHER BNAC07G15400D PROTEIN 29 102 - -
Sto5g0073 427 PANTHER BNAC07G15400D PROTEIN 110 421 - -
Sto5g0073 427 SUPERFAMILY Pseudouridine synthase 306 420 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0073 Sto-Chr5 460422 465339 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0073 K07583 - vvi:100242087 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0073 5 460422 465339 Sto5g0073 5 460422 465339 ECH