Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0067 ATGGCAGGCCAGTGCTCTAATGATAGTCCCAGTGCTAGCAGTATTTCAGCAGAATGTTCTGATTCAACTGTTCAGCTCAATATCAAGACTCTAGATTCCCACATTTACAGCTTTCAAGTGGATAAAAATaTGCCAGTTTCACTATTGAAAGAGAAAGTAGCGAATGAAACTGGCATTCCAGTTGTTCAGCAACGGCTAATATTCAGGGGGAAGGTCTTAAAGGATGATCATATTCTTTCTGAGTATCACGTCGAGAATGGAGATACACTGCATTTAGTTGAAAGGCAACTAAACCAGTCACAGGCTCCTGGTACAAGTTCTGGTGAGACAACTGGTACCAATGGTAACCGAGGAAATGATGCAGGCTCTGGGGCACCTCGTAACCGAGTTGGGCAAATTTCACATAGTGTTGTTTTGGGGACCTTTAATGTGGGGGACCAAGGTGATGGTGTTGTTCCTGACCTAAGTCGGGTTATTGGGGCGGTTTTGAACTCAATTGGAATTGGTGGGCAGAGCACTTCTGGTGTTACAAATGTTATGCAGTCTTCTTCTTCAATCATAGAATTTCCCTTTCATGTTGGTAAATGTTATATTGCTCCATGCATCCTGCATTTTATTTCCTTTGAACTCACTGGGTATATTTCTGAACTGGAGCCGAATCCATCTATTCAGGGTTCTTCTGGGAATGGAACTGAAGGAATGCCTGTTGGGAATCAGAACCATTCAGGAAATCAAGCACAATCTGGACAGACATTTTCCAGTCAACCGTTCCAGTCTTTGCCTCAAGTAGTTCAGATTCCTCTGGCTGCTGGGTCCATAACCATTCCATCACTCAATGCACCAATTCCTGATTCACTGGATACTCTGGCTGAGTTTATTAATCGCATGGAGCAGACACTATCACAAAATGGTTATCAACCAAACTTTTCTTCTACTAATGCTGGAGAGCAAACACGGGTGGAATTACCTTCTAACCCGCAAGGGTTGCCAACAGTTGAAGCATTAAGCACTGTGTTGCATCGTGCAGAACGGCTACTCGGAGGCCGCGCTGTTGCTGCACTATCTCATATTGCAGGACGCTTGGAGCGAGAGGGAACAACATCTGATCAAAGTATAAGGGGTCAAATACAGTCAGAATCAATGCAAATAGGACTTGCCATGCAGCATTTGGGTGCCTTTCTGCTTGAGCTAGGCCGCACAATCTTGACACTGCGCATGGGCCAGTCTTCTGCTGAATCTGCTGTCAATGCTGGGCCAGCAGTTTATATTTCTCCATCAGGACCTAATCCTATAATGGTGCAGCCTTTCCCACTTCAGACTAGCTCTCTCTTTGGTGGTTCTGTTCCTTCAACTCCTGCAACATTTGGCGCAGTTGGTGTTGGAAATCCCCCTCGGAATGTAAACATCCATATACATGCCGGTACCTCTCTTGCACCAATTGTTTCAGCAATTGGTTCTAGGCCAAATAATGGGGAAGGGGTACCAAATGAACGGCGTAATGCTCCTGGCTCTGCCGATTTAGGTTCAACTCGTGTTCTACCTGTAAGAAATATCATTGCAGCAGCTGTTCCAGCACGTGCTCCTGGTGTTGGGGTTGGTGGCAGCACACAACCCAGTCTTGGTGTTTCAACATCACAGCCGCCTTCTGATTCAGTTTCACTATCATCCGTTTTAGCTGAAGTCAATTCTCGTATTAGAAACCTTGTTGGGAACACACAAGGAGATAACACAGTTTTGTCAGGTCAAGTGGAATCAACCAACCAGGACTTGTCTGTAGGTTCTGAATCACGACCTACTCCAGGAAATGAACAGGTAGATACTAGGGGGTCAAATGGTGTTGGGGCTGCTAGTGTGTCTTCAGTTGGATGCTCATCTGCAAGTGGGGTAACTAAGCCCCAGCCTGAGGCAGTCCAAACCAATGACAATGAGGGGAGAGATGGTTTGAGCAGCAAATCTGTTTCAACTTCTTCCAATCAAGATTCACTAAGTTGTTCAAGTGGAGAAACAGTATTGAATCCAAAAAATGCTCAATCTGATAGTGGAAAACATCATTCAACTGCAAGTGCCAAAGCTGCTCCACTTGGATTGGGTATGGGTGGTTTGGAACGTAAGAGGAGAACCAGGGTTCCAGATCCAGTAGGTAAAGGTACTGATGATGGATCTGCAAGTTCTTCCAGTAATCAAAATCAGCAAGCTAGAACAAGTGGACAACATATATTGCAAGCTCTTGCAAGTCATGGAACTTCTATGAACCAGAGAAATGCCAATGTGCCACCCCAGGGATCCTCTTCCCCTGGTGATGGCCAGATTGATGTGGCTGGCGTTATGTCTCAGGTTTTGCATAGTCCTGCTTTGAATGGTTTGTTGGCAGGGGTTTCACAGCAAACTGGAGTTGGCTCTCCTAACGACTTGAGGAACATGTTGGAGCAGTTCACACAGAGCCCACAGATGAGGAACACTGTCAATCAAATTGTTCAACAGGTTGGCAGTCAGGATATGGGAAATATGTTTGCTGGAATGGAAAGAGAGCAAAGTAGTGGCTTTGACTTGTCAAGGATGTTTCAACAGATGATGCCTATTGTATCTCAAGCTCTTGGTGGTGGGTCTCCTTCTCAGCCATTCTCTTCTGCAGGGAGAGATCCCCAGGCACCTTACAGAGATGGAACACTTAGTAGAGATGAGAATTCTGGTTATCGAAGTTTACAGATCAACCTTCAACCAGTAGCGGAGAGGATTGAGCACCTAAGTCCTCCTGCTGATGTTTTCCGTGCTGTGGTTGAAAATGCTATCCAGCTATATGGAAGTGGAAATTCTTCTGATTCTCTTCTCGATGAGTTGTGCAGCGACGAGGGTCTTGCCAGTGTAAGTATTCCTTCTGTCATTTGCAGGCTATATCTGAAAATCCTGAATGACTTGGTGGCGGAGCCTAAGGGTGCAGACTGTGGAGTGCTAAATTTTGACGTGGTTATGCTCAAATCCAAGAATGAAGAAGGATTTTAG 3000 0.454 MAGQCSNDSPSASSISAECSDSTVQLNIKTLDSHIYSFQVDKNMPVSLLKEKVANETGIPVVQQRLIFRGKVLKDDHILSEYHVENGDTLHLVERQLNQSQAPGTSSGETTGTNGNRGNDAGSGAPRNRVGQISHSVVLGTFNVGDQGDGVVPDLSRVIGAVLNSIGIGGQSTSGVTNVMQSSSSIIEFPFHVGKCYIAPCILHFISFELTGYISELEPNPSIQGSSGNGTEGMPVGNQNHSGNQAQSGQTFSSQPFQSLPQVVQIPLAAGSITIPSLNAPIPDSLDTLAEFINRMEQTLSQNGYQPNFSSTNAGEQTRVELPSNPQGLPTVEALSTVLHRAERLLGGRAVAALSHIAGRLEREGTTSDQSIRGQIQSESMQIGLAMQHLGAFLLELGRTILTLRMGQSSAESAVNAGPAVYISPSGPNPIMVQPFPLQTSSLFGGSVPSTPATFGAVGVGNPPRNVNIHIHAGTSLAPIVSAIGSRPNNGEGVPNERRNAPGSADLGSTRVLPVRNIIAAAVPARAPGVGVGGSTQPSLGVSTSQPPSDSVSLSSVLAEVNSRIRNLVGNTQGDNTVLSGQVESTNQDLSVGSESRPTPGNEQVDTRGSNGVGAASVSSVGCSSASGVTKPQPEAVQTNDNEGRDGLSSKSVSTSSNQDSLSCSSGETVLNPKNAQSDSGKHHSTASAKAAPLGLGMGGLERKRRTRVPDPVGKGTDDGSASSSSNQNQQARTSGQHILQALASHGTSMNQRNANVPPQGSSSPGDGQIDVAGVMSQVLHSPALNGLLAGVSQQTGVGSPNDLRNMLEQFTQSPQMRNTVNQIVQQVGSQDMGNMFAGMEREQSSGFDLSRMFQQMMPIVSQALGGGSPSQPFSSAGRDPQAPYRDGTLSRDENSGYRSLQINLQPVAERIEHLSPPADVFRAVVENAIQLYGSGNSSDSLLDELCSDEGLASVSIPSVICRLYLKILNDLVAEPKGADCGVLNFDVVMLKSKNEEGF 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0067 999 MobiDBLite consensus disorder prediction 536 553 - -
Sto5g0067 999 MobiDBLite consensus disorder prediction 750 767 - -
Sto5g0067 999 MobiDBLite consensus disorder prediction 718 736 - -
Sto5g0067 999 MobiDBLite consensus disorder prediction 221 254 - -
Sto5g0067 999 MobiDBLite consensus disorder prediction 569 736 - -
Sto5g0067 999 CDD Ubl_ubiquitin_like 26 93 - -
Sto5g0067 999 MobiDBLite consensus disorder prediction 488 508 - -
Sto5g0067 999 SUPERFAMILY Ubiquitin-like 19 97 IPR029071 -
Sto5g0067 999 MobiDBLite consensus disorder prediction 99 127 - -
Sto5g0067 999 ProSiteProfiles Ubiquitin domain profile. 24 99 IPR000626 GO:0005515
Sto5g0067 999 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 6 953 - -
Sto5g0067 999 SMART ubq_7 24 95 IPR000626 GO:0005515
Sto5g0067 999 MobiDBLite consensus disorder prediction 750 770 - -
Sto5g0067 999 Pfam Ubiquitin family 26 96 IPR000626 GO:0005515
Sto5g0067 999 PRINTS Ubiquitin signature 55 75 IPR019956 -
Sto5g0067 999 PRINTS Ubiquitin signature 76 97 IPR019956 -
Sto5g0067 999 Gene3D - 13 108 - -
Sto5g0067 999 PANTHER OS07G0498800 PROTEIN 6 953 - -
Sto5g0067 999 MobiDBLite consensus disorder prediction 99 121 - -
Sto5g0067 999 MobiDBLite consensus disorder prediction 865 896 - -
Sto5g0067 999 MobiDBLite consensus disorder prediction 527 553 - -
Sto5g0067 999 MobiDBLite consensus disorder prediction 569 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0067 Sto-Chr5 419188 427318 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0067 24 95 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 38.889 8.89e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0067 - - gmx:100783611 1190.25