Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0041 ATGTTCAGTTTGGATGAGTTGAAGAGTGCTACTGGAAACTTCAAACCGCACACAGTGGTTGGAGAGGGAGGATTCGGAAGAGTATTCAAGGGATGGATAGAGGAGAAGACATTGAAGCCTTCGAGATCAGTGGGGGTTGGAATTGCAGTGGCGGTGAAGAAATCAAATCCGGATAGCATGCAAGGGTTTGAAGAATGGCAGAGTGAGGTTAAATTCTTGGGCAAGTTGTCGCATCCTAACCTCGTCAAACTCATTGGTTACTGCTGGGAGCAAAAGCAGTTCCTACTTGTGTACCAATACATGCAGAGAGGCAGCTTGGAAAACCACCTCTTCGGAAGAGGCCCAGAACCTCTTTCATGGGACATAAGGCTTAAGATAGCCATAGGGGCAGCTCGAGGACTGGCTTTCTTGCACCATTCTCAGAACTCGGTTATATACAGGGACTTCAAGTCCTCTAACATTTTGCTGGATGGGGGTTTCAATGCCAAGCTTTCAGATTTCGGACTCGCAAAGTTTGGCCCCGTCAACGGCAGATCCCACGTAACCACGCGGGTCATGGGCACTTATGGTTACGCCGCCCCTGAGTACATGGCCACAGGTCATCTGTATGTGAAAAGCGATGTATACGGATTTGGGGTGGTGCTGCTGGAACTATTGACAGGCCTACCAGCCGTGGACCCCAACAGACCTCCAGCTCAACTCAGTTTGGTTGACTCCAACAAGCCCTTTCTCCATCACAAGAAGAAGCTCAAAAGGATCATCGACCCAAAGCTCGCCCAAAACTATTCCCTCCCTGCTGCATTTCAACTCGCCCAACTCATCCTCCAATGTTTAGAATCTGACCCAAAGAATCGCCCTTCTATGCACCACAGCACCCTCCAAGGAAGCCAAAGACCAAAGTCCGGCGGAAGAAGTATCCATTTGGATGATGATCAAGAACACGATTCAGAACAAGGCGGTGTATGCATGGGTTTGATACCACCATTTCAAAGCAAAGTTGTCACATAA 1008 0.4881 MFSLDELKSATGNFKPHTVVGEGGFGRVFKGWIEEKTLKPSRSVGVGIAVAVKKSNPDSMQGFEEWQSEVKFLGKLSHPNLVKLIGYCWEQKQFLLVYQYMQRGSLENHLFGRGPEPLSWDIRLKIAIGAARGLAFLHHSQNSVIYRDFKSSNILLDGGFNAKLSDFGLAKFGPVNGRSHVTTRVMGTYGYAAPEYMATGHLYVKSDVYGFGVVLLELLTGLPAVDPNRPPAQLSLVDSNKPFLHHKKKLKRIIDPKLAQNYSLPAAFQLAQLILQCLESDPKNRPSMHHSTLQGSQRPKSGGRSIHLDDDQEHDSEQGGVCMGLIPPFQSKVVT 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0041 335 MobiDBLite consensus disorder prediction 284 324 - -
Sto5g0041 335 Gene3D Transferase(Phosphotransferase) domain 1 101 309 - -
Sto5g0041 335 PANTHER OS01G0588500 PROTEIN-RELATED 1 290 - -
Sto5g0041 335 ProSitePatterns Protein kinases ATP-binding region signature. 20 53 IPR017441 GO:0005524
Sto5g0041 335 ProSiteProfiles Protein kinase domain profile. 14 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0041 335 PANTHER SERINE/THREONINE-PROTEIN KINASE CX32, CHLOROPLASTIC-RELATED 1 290 - -
Sto5g0041 335 CDD STKc_IRAK 20 289 - -
Sto5g0041 335 MobiDBLite consensus disorder prediction 303 317 - -
Sto5g0041 335 MobiDBLite consensus disorder prediction 287 301 - -
Sto5g0041 335 Pfam Protein tyrosine and serine/threonine kinase 18 290 IPR001245 GO:0004672|GO:0006468
Sto5g0041 335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Sto5g0041 335 Gene3D Phosphorylase Kinase; domain 1 1 100 - -
Sto5g0041 335 SUPERFAMILY Protein kinase-like (PK-like) 2 290 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0041 Sto-Chr5 256826 260523 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0041 2 288 Glycoside Hydrolase AT3G07070 49.655 1.87e-90 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sto5g0041 PK_Tyr_Ser-Thr 2.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0041 - - aprc:113865973 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0041 5 256826 260523 Sto5g0041 5 256826 260523 ECH