Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0040 ATGGGCAAAAAGAGAGACGGTGATCTGAGGAAGGAGGAGGGGAGAGGGGAAATTCTGTCTCATGAGTCAGAGGACAAGTTGGTTCGAATAATTCTTGCAAAGGAAGAAGCTGGTAGTGGGCGCCCCAAGGCTCATGCCGATAACGGTGAGGATGGATGCAAGGCAGGACCCTCAGATGGGAAGGGGAAGAATGCCAAATCCCCCAAAGCCGGTGCTGCCCGTAGTTTTACTTTTCGTGAACTTGCAGCTGCAACCAGGGGTTTTAAGCAGGTCAATTTGATTGGGGAAGGGGGTTTTGGAAGGCTCGTTGCCGTTAAACAGTTAAATCATGATGGCCAACAAGGTTTTCAGGAATTCATAGTGGAGGTTCTCATGTTAAGCCTGCTACACCATTCTAATCTTGTCACCTTGTTTGGTTACTGCACTGATGGAGACCAAAGGCTATTGGTTTATGAATACATGCCTATGGGTAGCGTGGAAGATCATCTTTTCGATTTAAAACCAAATGAAGAGCCACTAAGTTGGAGTGATCGGATGAAGATTGCTGTTGGAGCTGCGAGAGGCCTTGAGTACCTTCATTGTAAAGCAAATCCACCTGTTATCTATCGGGACTTGAAATCTGCAAACATCTTATTAGACAATGATTTCAACCCAAAACTCTCAGATTTTGGGCTTGCTAAACTTGGTCCTGTAGGAGACAATACTCATGTTTCGACAAGAGTGATGGGAACATATGGCTACTGTGCCCCAGAGTATGCCATGAGTGGAAAATTAACTCTTAAATCTGATATCTATTGCTTTGGTGTGGTTTTGATGGAGTTGATTACTGGACGAAGGGCAATAGATACCAGTAAGAAACCAGGGGAGCAAAACTTAGTTGCATGGTCTCGGCAGTTTTTAAAGGATCGGAGAAAGTTTGTTCAGCTAGTTGATCCTCGTCTAGAAGGACAATTCCCTTTACGCTGTTTGCATCATGCAATTGCTATAACTGCAATGTGTCTCCAGGAGCAACCAAATTTCCGCCCACTAATTGGTGATATTGTTGTTGCACTGGAGTACCTACATTCTCAGAGTAAAACCCCAGAAGTTCACAAGGGGAGGAATGTGGAAGAAATTCCAAGGGCGTTGGAAAATTTGGGGTTGGGTTTTGGTATATTAGCACCAAAGTCAAAGTACCAATAA 1182 0.4442 MGKKRDGDLRKEEGRGEILSHESEDKLVRIILAKEEAGSGRPKAHADNGEDGCKAGPSDGKGKNAKSPKAGAARSFTFRELAAATRGFKQVNLIGEGGFGRLVAVKQLNHDGQQGFQEFIVEVLMLSLLHHSNLVTLFGYCTDGDQRLLVYEYMPMGSVEDHLFDLKPNEEPLSWSDRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYCFGVVLMELITGRRAIDTSKKPGEQNLVAWSRQFLKDRRKFVQLVDPRLEGQFPLRCLHHAIAITAMCLQEQPNFRPLIGDIVVALEYLHSQSKTPEVHKGRNVEEIPRALENLGLGFGILAPKSKYQ 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0040 393 MobiDBLite consensus disorder prediction 36 57 - -
Sto5g0040 393 SMART serkin_6 88 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0040 393 SUPERFAMILY Protein kinase-like (PK-like) 70 359 IPR011009 -
Sto5g0040 393 MobiDBLite consensus disorder prediction 1 20 - -
Sto5g0040 393 Gene3D Transferase(Phosphotransferase) domain 1 154 375 - -
Sto5g0040 393 CDD STKc_IRAK 94 352 - -
Sto5g0040 393 PANTHER OS07G0668900 PROTEIN 59 365 - -
Sto5g0040 393 Pfam Protein tyrosine and serine/threonine kinase 102 349 IPR001245 GO:0004672|GO:0006468
Sto5g0040 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Sto5g0040 393 Gene3D Phosphorylase Kinase; domain 1 62 153 - -
Sto5g0040 393 MobiDBLite consensus disorder prediction 36 71 - -
Sto5g0040 393 ProSiteProfiles Protein kinase domain profile. 88 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0040 393 PANTHER TELOKIN/MYOSIN LIGHT CHAIN KINASE-RELATED 59 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0040 Sto-Chr5 249591 254238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0040 49 354 Glycoside Hydrolase AT3G07070 60.736 3.82e-140 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Sto5g0040 Pkinase 3.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0040 - - zju:107419850 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0040 5 249591 254238 Sto5g0040 5 249591 254238 ECH