Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0036 ATGACGGAGGAGCAAATGGAGGTTCTGAGGAAGCAGATCTGTGTGTACTCCACCATATGTGAGCAGCTGGTGGAGATGCACAAGGCCATCACGGCTCACCAACATCTACCTTCCTTATACTGCGATCCCCTCATTGGACACAAGATTTCTTCTGGGAGGCAGCGTTGGACTCCCACACCCCTTCAGCTTCACATCCTTGAGCGTCTTTTTGAACAAGGCCATTCAACTCCAACCAAGCACAACATCAAACACATCACCCTTCAACTCGCCCACCATGCTCCAATTACTGAGACCAATGTCTATAATTGGTTTCAAAACCGAAGAGCTCGTTCCAAACGCAAGCACCAATtgcctccctctccctctcccaaATATTGA 378 0.455 MTEEQMEVLRKQICVYSTICEQLVEMHKAITAHQHLPSLYCDPLIGHKISSGRQRWTPTPLQLHILERLFEQGHSTPTKHNIKHITLQLAHHAPITETNVYNWFQNRRARSKRKHQLPPSPSPKY 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0036 125 ProSiteProfiles 'Homeobox' domain profile. 49 114 IPR001356 GO:0003677
Sto5g0036 125 CDD homeodomain 53 115 IPR001356 GO:0003677
Sto5g0036 125 PANTHER WUSCHEL-RELATED HOMEOBOX 13 1 116 IPR044559 GO:0003700
Sto5g0036 125 SMART HOX_1 51 118 IPR001356 GO:0003677
Sto5g0036 125 ProSitePatterns 'Homeobox' domain signature. 89 112 IPR017970 GO:0000981|GO:0006355
Sto5g0036 125 Pfam Homeodomain 53 113 IPR001356 GO:0003677
Sto5g0036 125 SUPERFAMILY Homeodomain-like 49 117 IPR009057 -
Sto5g0036 125 Gene3D - 54 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0036 Sto-Chr5 229076 229453 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0036 1 114 Wox Gene Family AT4G35550 62.295 9.98e-50 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Sto5g0036 Homeodomain 6.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0036 - - tss:122657985 170.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0036 5 229076 229453 Sto5g0036 5 229076 229453 ECH