Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0028 TTGAGGAGCGCGTCGTCGACTCATCGCCACCGCTGCCGGAGAGGTGCTGGTTCGTCGTTCTTCTCCATTACTGTGCTGGTACGTCGTTCTTCTCCATTTGGTTCAcctctctttctttttggtCACTCCGTTCTCCAGCAAGAATTCGACGGAGAGAAGCACCGCGAGAAGAAGTTGAAGTGCGATAAGTGCTCTAAGCCTTACGCCGTTCAGTCCGATTGGAAAGCTCACTCCAAAATTTGCGGCACCAAGGGCAATGTGGGGCTTATTTTCACGAACCTCCAATACATTTGTGCAAAGGCGAAGAAGCTCAAGTGCAGCTGTGCATCGAGAGAATGTAATGAACGTGTAAATTGCAAGAGTTCCAGTCACTTCTCTTTCCCGAGCATAAAGTTTGATGAGCTCATTGAATTGGGTATAGCCTTGCTTGGAGTGATGTCGATGATACAGAGAGAAGAGGCTTCTACTTCTGTCCAAGAAGATTTAAGTTATCTCCTTGATATTCTTGAATGGGCTAAGTGTAGCGGTGGAAATGTCTAG 540 0.4593 LRSASSTHRHRCRRGAGSSFFSITVLVRRSSPFGSPLFLFGHSVLQQEFDGEKHREKKLKCDKCSKPYAVQSDWKAHSKICGTKGNVGLIFTNLQYICAKAKKLKCSCASRECNERVNCKSSSHFSFPSIKFDELIELGIALLGVMSMIQREEASTSVQEDLSYLLDILEWAKCSGGNV 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0028 179 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 53 92 - -
Sto5g0028 179 PANTHER C2H2-TYPE ZINC FINGER PROTEIN 53 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0028 Sto-Chr5 190260 193186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0028 53 84 IDZ Gene Family AT3G50700 90.625 4.08e-13 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sto5g0028 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0028 - K25869 sind:105156147 68.9366