Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g3040 atggatgTAAAAGGAAATGGAGGAGTCCAGAAGGACGCCGTGGACGACCTGGACCTCCGACGAGGGCCTTGGACCGTTGATGAGGATCTCACACTCATCAATTACATTGCCACTCACGGCGAAGGTCGCTGGAATTCCCTTGCTCGCTCCGCCGGGCTGAAACGTACCGGGAAGAGCTGCAGATTGAGATGGCTAAACTATCTGCGTCCGGATGTTCGACGTGGAAATATCACACTTGAAGAACAGCTTCTAATTTTGGAGCTTCATTCTCGCACACCAGCTTCATCCGACTCCTTTGACACCCAGATTTCCGACTACAACAATAATTACACTACTACTCTCCCAACTCCCAATTACTACCAACCGCCCTCCTCTCACATCACAACCCCATCTCCCTTTTTCTCTCAACCATTTGATTTTAATTCCCTTCCAAACAACTCCTCCATTCAACCCCCCGACACCTTCGACAATTTCTGGAACCTTGACAACATCCTCTTACAACAACACCTCGATCTTGATGccatcatataa 531 0.4746 MDVKGNGGVQKDAVDDLDLRRGPWTVDEDLTLINYIATHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRTPASSDSFDTQISDYNNNYTTTLPTPNYYQPPSSHITTPSPFFSQPFDFNSLPNNSSIQPPDTFDNFWNLDNILLQQHLDLDAII 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g3040 176 SMART sant 20 70 IPR001005 -
Sto4g3040 176 Pfam Myb-like DNA-binding domain 21 68 IPR001005 -
Sto4g3040 176 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 72 IPR017930 -
Sto4g3040 176 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 2 91 IPR044676 GO:0003700|GO:0006355|GO:0043565
Sto4g3040 176 PANTHER MYB TRANSCRIPTION FACTOR 2 91 - -
Sto4g3040 176 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Sto4g3040 176 SUPERFAMILY Homeodomain-like 22 91 IPR009057 -
Sto4g3040 176 CDD SANT 23 68 IPR001005 -
Sto4g3040 176 Gene3D - 18 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g3040 Sto-Chr4 30626502 30627907 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g3040 17 91 MYB Transcription Factor Family AT1G48000 76.000 2.25e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto4g3040 Myb_DNA-binding 1.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g3040 K09422 - ini:109175272 150.984