Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g3017 CTGCTATCGGTTGCGGGTGAGCTCATTACTTGGCTGTTTGGATTCTATGCGGATTCTACTATTCAAGTATCGGAGTCGAGTTTCTTGTCAGATTCTTCCTGGCTGATGGCTGAAACCAGAAAGCACATTCCTACTAAACAATTAGACCTTGATGAGATACTAAGAGAAGCAGAGCAACGGTGGCTTCGACCTCCCGAAATCTGTGAAATACTTCGCAATTATCAGAAGTTTGTGTTATCGCCTGATCCACCTGTTAGACCTCCAGCGGGGTCACTGTTTTTGTTTGATCGAAAAGTACTTCGTTACTTTCGCAAAGATGGTCACCGATGGAGGAAGAAAAAAGATGGAAAGACTGTTAGAGAAGCTCATGAAAAGTTGAAGGCTGGCAGCGTAGATGTTCTGCATTGTTACTATGCTCATGGGGAGGATAATGAGAACTTTCAACGGCGAAGTTATTGGATGCTTGATGAGAAGTTAGAGCACATTGTCCTTGTTCATTACCGAGAAGTTAAAGAGGGCTACAAGACTGCCATTTCACGGTTGCCTGCAAATCTAGTACCCTTGGCTGGTAGCCCTCAGAGTAGTGCTGCACAAGTTAATTCGCCTCTTTCTTTAGCCCAAATATCATATGCATCAAGTGCAAATAGAGTTGATTGGAGTGGAAGAGCACCATCTTCAGACTATGAGGATGTGGACTCTGCAAGTGGTCATCGTGTCTCATATCGCACTCAACCTATTGGCAGTTCCCTACCTCATAGTGCACCTTTGCTCCCACATGAATCCAATGATTTTTCTCAGTTGCCGAGCATCCCCCATAATTCATGGTTATCTTCTCTCCCTAACTTTTATCCTGGcacttcttcatctccatggcCATTAAATCAGAACTCTTGCACAAACACAGTTAGTATGCATGACGTAAATCTTCATGCTGAAGGATCCAATGAAGTCTCCAAAGCTGATTTCGTTGTTCATAAACAAGAACATGGCAGGTTAGATGGAGATAGCACCATCCAAGAGGCTGCTGTAACTAGCAGAGATAGGCTGTTCACTGACATGTACGTCCAGTCAATTATAGAAGTTTCGGAGACAGTAAATCAGGTACAGAAGGAGCATGATTTAAATTCAGATCATATCCAATTCCATGATACTACTGATCATGCAGCTGTTGAATCTTCAACTTTCCTAGTTGAACCAAAACTTAGAAATGAAAGCACATATAATGGTGAATCGGAACATATTGAATTTGCAGAGCTAAAGAAACTTGATAGTTTTGGAAGGTGGATGGATAAGGAAATTGGTGGAGACTGTGATGATTCCTTGATGGCTTCAGACTCTGGAAACTATTGGGATACGCTTGATGCTCATAATGGGGATAAGGAAGTGTCCAGTTTACATATGCAGTTGGATATGGATTCATTGGGTCCTTCTCTTTCCCAAGAACAACTATTTAGCATCCATGAGTTTTCTCCAGATTGGGCGTATGCTGGGGTTAAAATGAAGGTTTTAATAGTTGGCACATTCCTGGGGAGTAAGAAGCTTTCTACTGAGATAAAGTGGGGATGTATGTTTGGTGAAATTGAGGTTTCTGCTGAAGTTATAAATGATAATGTCATTAGGTGTCAGACTCCTTTTCATTCACCTGGCCGTGTTCCATTCTATGTTACCTGCAGTAATAGGTTAGCCTGTAGTGAGGTGAGGGAATTTGAATATCGTGAAAACCCAACTGTAGGTCCAATGGGTATAAGAATCACACCTGAAGATGAAGTACGCCTGCAATTGCGACTACTGAAGTTAGTAGACTTGGGACCTGATAAGAACTGGTTGAACTGCTCTGTTGCTCAATGTGAGAAATGTAAGCTTAGAGAATTGATGTACTCGAGAAGAGATGAGAATGAAATATTTCAAGATACTTCAAAGATTAGTCAAAGTGATTATGTGAACCATAGGGATGTGTTAGTACAGAGATTATTGAGAGACAAGCTTTATGAGTGGTTGGTGTCAAAGATCCATGAAGAAGGAAAAGGACCTCATGTGTTGGATAACGAAGGCCAAGGAGTTATACATTTGGCCGCTGCTCTTGGTTATGCATGGGCTATGTGTCCCTTAGCTGCTGCCGGTGTCAGTCCTAACTTCAGAGATGCTCATGGAAGAACAGGACTTCACTGGGCATCCTATTTTGGGAGAGAGGAAACTGTGATTGCGCTGGTCAAATTAGGTGCAGCCCCAGGTGCTGTTGAGGATCCAACATCAGCATTTCCTCGAGGGCTAACAGCTGCCGATTTAGCTTCAAGTAGAGGACATGAAGGCATTGCAGCATATTTAGCTGAGGCTGATCTTACAAGTCACTTATCTACATTGACTGTCAATGAAAATGAGATTGACAATATTGCTGCAACCAGAGCAGCTGAAAGTGCTTATGAGACTGCACAAGCTGACTCATCTAATATGACAATGGACGAGCAACTCTATCTAAAAGAGTCACTTGCAGTTTTTCGAAAATCAGCTCATGCAGCTGCTTTAATTCAAGCTTCCTTCAGAGCAAAATCATTCCATCAGAGGCAATTAACCAAAAGTAACAGTGATATATCCGAAGCAGCAGTTAACCTAGTTGCAGCTAGCTCTTTGAACAAGGTTCAGAACACAGGTCACTTTAATGATTATCTGCATTTTGCTGCTTTGAGGATCCAAAAGAGATATCGAGGGTGGAAGGGAAGAAAAGAATTTTTGAAGATACGAAATCGCATTGTAAAAATTCAGCTTGACTCTAATGCACAGGCCCATGTTAGAGGACACCAAGTTCGTAAGCAATACAAAAAGGTTGTTTGGTCTGTTAGCATTGTGGAGAAGGCAATACTGCGTTGGAGGCGGAAACGAGCTGGCCTGCGAGGATTTCGAGTTGAGCAGCCAGTTGGCATTTTGGCTTCAGGTGCTGAGAAAAGTGACGAATATGAATTTCTGAGCATTGGGAGGAAACAGAAGTCTGATGATGTTGGTAAGGCTCTGGCTAGAGTTAAGTCCATGGTTTATAACCCAGAGGCACGTGATCAGTATATGAGGCTTGTCAAGAAATTTCAGAATTTCAAGAGAGATGGTATCGTTTCTTTTGTTGTAACCAACTCTGATTACTTTATCTGTTTTGCTGCCTGTTTTGCCATGAATGATATTGAGCAGATCGGTGATGGTGGAAGCAGTTAA 3198 0.4193 LLSVAGELITWLFGFYADSTIQVSESSFLSDSSWLMAETRKHIPTKQLDLDEILREAEQRWLRPPEICEILRNYQKFVLSPDPPVRPPAGSLFLFDRKVLRYFRKDGHRWRKKKDGKTVREAHEKLKAGSVDVLHCYYAHGEDNENFQRRSYWMLDEKLEHIVLVHYREVKEGYKTAISRLPANLVPLAGSPQSSAAQVNSPLSLAQISYASSANRVDWSGRAPSSDYEDVDSASGHRVSYRTQPIGSSLPHSAPLLPHESNDFSQLPSIPHNSWLSSLPNFYPGTSSSPWPLNQNSCTNTVSMHDVNLHAEGSNEVSKADFVVHKQEHGRLDGDSTIQEAAVTSRDRLFTDMYVQSIIEVSETVNQVQKEHDLNSDHIQFHDTTDHAAVESSTFLVEPKLRNESTYNGESEHIEFAELKKLDSFGRWMDKEIGGDCDDSLMASDSGNYWDTLDAHNGDKEVSSLHMQLDMDSLGPSLSQEQLFSIHEFSPDWAYAGVKMKVLIVGTFLGSKKLSTEIKWGCMFGEIEVSAEVINDNVIRCQTPFHSPGRVPFYVTCSNRLACSEVREFEYRENPTVGPMGIRITPEDEVRLQLRLLKLVDLGPDKNWLNCSVAQCEKCKLRELMYSRRDENEIFQDTSKISQSDYVNHRDVLVQRLLRDKLYEWLVSKIHEEGKGPHVLDNEGQGVIHLAAALGYAWAMCPLAAAGVSPNFRDAHGRTGLHWASYFGREETVIALVKLGAAPGAVEDPTSAFPRGLTAADLASSRGHEGIAAYLAEADLTSHLSTLTVNENEIDNIAATRAAESAYETAQADSSNMTMDEQLYLKESLAVFRKSAHAAALIQASFRAKSFHQRQLTKSNSDISEAAVNLVAASSLNKVQNTGHFNDYLHFAALRIQKRYRGWKGRKEFLKIRNRIVKIQLDSNAQAHVRGHQVRKQYKKVVWSVSIVEKAILRWRRKRAGLRGFRVEQPVGILASGAEKSDEYEFLSIGRKQKSDDVGKALARVKSMVYNPEARDQYMRLVKKFQNFKRDGIVSFVVTNSDYFICFAACFAMNDIEQIGDGGSS 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g3017 1065 ProSiteProfiles Ankyrin repeat profile. 716 748 IPR002110 GO:0005515
Sto4g3017 1065 ProSiteProfiles IQ motif profile. 918 946 IPR000048 GO:0005515
Sto4g3017 1065 ProSiteProfiles IQ motif profile. 889 918 IPR000048 GO:0005515
Sto4g3017 1065 Pfam IPT/TIG domain 486 571 IPR002909 -
Sto4g3017 1065 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 50 1020 - -
Sto4g3017 1065 SUPERFAMILY Ankyrin repeat 662 778 IPR036770 -
Sto4g3017 1065 SUPERFAMILY E set domains 486 572 IPR014756 -
Sto4g3017 1065 SMART CG_1_2 53 171 IPR005559 GO:0003677
Sto4g3017 1065 Pfam IQ calmodulin-binding motif 926 939 IPR000048 GO:0005515
Sto4g3017 1065 Pfam IQ calmodulin-binding motif 892 909 IPR000048 GO:0005515
Sto4g3017 1065 Pfam CG-1 domain 56 169 IPR005559 GO:0003677
Sto4g3017 1065 Gene3D - 887 921 - -
Sto4g3017 1065 MobiDBLite consensus disorder prediction 221 263 - -
Sto4g3017 1065 SMART ANK_2a 716 745 IPR002110 GO:0005515
Sto4g3017 1065 SMART ANK_2a 755 784 IPR002110 GO:0005515
Sto4g3017 1065 Gene3D - 652 812 IPR036770 -
Sto4g3017 1065 ProSiteProfiles Ankyrin repeat region circular profile. 716 741 - -
Sto4g3017 1065 ProSiteProfiles CG-1 DNA-binding domain profile. 50 176 IPR005559 GO:0003677
Sto4g3017 1065 Gene3D Immunoglobulins 479 578 IPR013783 -
Sto4g3017 1065 SMART iq_5 834 858 IPR000048 GO:0005515
Sto4g3017 1065 SMART iq_5 888 910 IPR000048 GO:0005515
Sto4g3017 1065 SMART iq_5 911 939 IPR000048 GO:0005515
Sto4g3017 1065 CDD IPT 485 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g3017 Sto-Chr4 30381989 30388983 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g3017 94 1051 CAMTA Transcription Factor Family AT2G22300 39.583 0.0 614
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Sto4g3017 CG-1 2e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g3017 K21596 - gmx:100818336 1399.03