Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g3005 ATGGTGATCATCAAGCTtgggaagaaggaggaagaggaagagggaaTAATAAAGCTTGGAAAGTATGAGGTTGGGAGAACACTAGGCAAAGGCAGTTTCGGAAAAGTGAAATTGGCCCTCAACATTCATTCTCATCAACATTTTGCCCTCAAGATTGTTGACAAGTCCAACATCATCCCTCTCAATCTCACCTATCAGATAAAGAGGGAGATAGCCACCTTGAAGCTCTTGAAGCATCCCAACCTTGTCAGATTGCACGAGGTTTTTGCTAGCAAAACCAAAATTTATATGGTCCTAGAGTATGTCAACGGAGAAGACTTGTTTGACAGAATTGCATCCAAAGGTAGACTTACAGAAGCTGAAGGTAGGAAGCTTTTCCAACAGTTAATTGATGGTGTGAGCTACTGTCACAATAAAGGTGTCTTCCACAGGGACCTCAAGCTGGAGAATGTACTTGTGGACAACAAAGGAAACATAAAGATAACTGATTTTGGCCTAAGTGCTTTACCCCAGCACCTTAGGAAAGATGGGTTGCTGCATACGACCTGTGGAAGTCCGAACTATGTTGCACCAGAGGTACTTGCTAATAGAGGCTACGACGGTGCTACATCAGATACATGGTCATGTGGTGTTATCTTGTTTGTAATCCTAACAGGATATCTTCCTTTTGATGATCGAAATATCGCAGTTCTCTATCAAAGAATAATTAAAGGAGATTTTAGGATACCAATATGGCTATCACCTGGTGCCCAAAACTTGATAAGGAGGATTCTTGATCCCAGTCCTATTACCCGGATAACACTCGCTGGTATCAAGGAAGATGAATGGTTCAGGAAGAAGTATGTTCCAGCAAATCCtgaagatgaagaggaagaagatgtgTATATTGACGAAGAGGCCTTTTCAAGCCATCAAGTGCCACATGAAGCAGAAAACAACAGTCTCGGCTCACCAACCCTTATCAATGCATTTCAGTTGATAGGGATGTCCTCATACTTGGACCTTTCTGGCTTCTTTGAGAAAGAGGATGTCTCCGAGAGGAAGATAAGATTCACATCCAACCATTCTGCCAAAGATCTGATTGAGAAGATTGGGGACATTGGAACAGAAATGGGATTCCGAGTCCATAACAAAAATGGGAAGTTGAAAGTGATTCAAGAGAAGTCGCACAGAAGTCCAAGTAGACTCTCAGTAGCAGCAGAGGTGTTTGAAATAAGCCCTTCCTTGTACGTAGTAGAATTAAGGAAAGCTTATGGAGACTCTTCTGTATATAGACAGTTGTGCAACAAATTAACAAATGATTTAGCCCTACCTCCAAGCCAAACGCTACAGGGCTCAGAAGTGAGAGGCGTCACATGA 1359 0.4062 MVIIKLGKKEEEEEGIIKLGKYEVGRTLGKGSFGKVKLALNIHSHQHFALKIVDKSNIIPLNLTYQIKREIATLKLLKHPNLVRLHEVFASKTKIYMVLEYVNGEDLFDRIASKGRLTEAEGRKLFQQLIDGVSYCHNKGVFHRDLKLENVLVDNKGNIKITDFGLSALPQHLRKDGLLHTTCGSPNYVAPEVLANRGYDGATSDTWSCGVILFVILTGYLPFDDRNIAVLYQRIIKGDFRIPIWLSPGAQNLIRRILDPSPITRITLAGIKEDEWFRKKYVPANPEDEEEEDVYIDEEAFSSHQVPHEAENNSLGSPTLINAFQLIGMSSYLDLSGFFEKEDVSERKIRFTSNHSAKDLIEKIGDIGTEMGFRVHNKNGKLKVIQEKSHRSPSRLSVAAEVFEISPSLYVVELRKAYGDSSVYRQLCNKLTNDLALPPSQTLQGSEVRGVT 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g3005 452 Pfam Protein kinase domain 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g3005 452 PANTHER - 9 437 - -
Sto4g3005 452 SUPERFAMILY Protein kinase-like (PK-like) 19 302 IPR011009 -
Sto4g3005 452 ProSiteProfiles Protein kinase domain profile. 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g3005 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Sto4g3005 452 Gene3D Kinase associated domain 1, KA1 316 437 - -
Sto4g3005 452 SMART serkin_6 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g3005 452 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Sto4g3005 452 PANTHER CBL-INTERACTING PROTEIN KINASE 21 9 437 - -
Sto4g3005 452 Gene3D Phosphorylase Kinase; domain 1 14 101 - -
Sto4g3005 452 Pfam NAF domain 318 376 IPR004041 GO:0007165
Sto4g3005 452 Gene3D Transferase(Phosphotransferase) domain 1 102 304 - -
Sto4g3005 452 ProSiteProfiles NAF domain profile. 316 340 IPR018451 GO:0007165
Sto4g3005 452 CDD CIPK_C 322 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g3005 Sto-Chr4 30320396 30324198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g3005 85 436 CBL-interacting serine-threonine protein kinases AT3G17510 68.839 1.85e-173 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sto4g3005 Pkinase 3.1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g3005 K07198 - gmx:100777468 666.381