Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2996 ATGCTCAATAGTCAATACCATACTTTGGCTACACAACCTTCTCCTCCTCTAATGGAAATGGATTTGGTGGACCAACTTGAGAATTCAGTTCGGGATTTCGTTGCTTCTGATGACTTCAATTGGATCAACCATCTCTCTGCAAACAGGTCAATGACAGCATCTGGAATGAACACAGTGAGTCCAAATACAAATCAGCTGTCCATACTCTATAATGGTGGTTTGTGTGTGTATGATGGGATTCCTACAGAAAAGGTGCATGAAATCATGCTTATTGCTGCAACTGCTGCTAAGTCTGCTGAACTGAAGAAGATTGGAACACAAACATCATCTATTCCCACAGGCCCATCTTCACCACAGGGAAGCACTTCTAATCTCCCTTCACTTCACCCACACAAGACTTCCATTTGTAGCTTGCCAGAATTACCATTAGCCCGCAGGCAGTCACTTCAGCGATTTCTTGAGAAGCGAAGattcagGCTGGGAAGCAGAGCTCCTTACTTAACCCCATCAACAACAAAAGTGGGTGAGAATGCATTAGATTTAGATTTGGCATTCTTCAAGTTCAAGGAACCAGAGCAGCAATTTCACCCAAGAATGGCTTCCTCCTGA 609 0.4335 MLNSQYHTLATQPSPPLMEMDLVDQLENSVRDFVASDDFNWINHLSANRSMTASGMNTVSPNTNQLSILYNGGLCVYDGIPTEKVHEIMLIAATAAKSAELKKIGTQTSSIPTGPSSPQGSTSNLPSLHPHKTSICSLPELPLARRQSLQRFLEKRRFRLGSRAPYLTPSTTKVGENALDLDLAFFKFKEPEQQFHPRMASS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2996 202 Pfam Jas motif 142 166 IPR018467 -
Sto4g2996 202 Pfam tify domain 60 93 IPR010399 -
Sto4g2996 202 ProSiteProfiles Tify domain profile. 59 94 IPR010399 -
Sto4g2996 202 PANTHER DIVERGENT CCT MOTIF PROTEIN 36 184 - -
Sto4g2996 202 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 36 184 IPR040390 -
Sto4g2996 202 MobiDBLite consensus disorder prediction 106 131 - -
Sto4g2996 202 SMART tify_2 59 94 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2996 Sto-Chr4 30275348 30276868 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2996 42 168 Tify Gene Family AT5G20900 43.284 2.49e-19 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Sto4g2996 tify 1.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2996 K13464 - gmx:100306045 153.295