Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2994 TTGTTGATAGCTTCTTCTTTCTTTGCTTTTGCTAACCTGGTTTCAATGGGTTTGTGTGATGTTGAGGAGTCGATCTCTGGTTTGGCAATTGGTCAAGCAATATATGAGGCAGCTCTAATAATTGCAGTTCTGAGATGGGTATTTTGCTGTGTTTCCAAGATTATCAAAAATAGGAGACACTCCCTTGAAACCCCAACAGATCATCACTCTTCTTCCTGTTCATGGGTGTGTTCCCAGATGATAAGAGACAGTACTCTAACATTGAGGACCTTTGGTGAAATAGTGGAGAAGGTGGGAGAAACAGAGGACACGTGTGCAGTGTGCTTGAACCAGATAAAAATGGAGGATGAGGTGAGAGAGCTGATGAATTGTGACCATGTATTCCACAGAGAATGCATAGACAGATGGTTGGATCATGATCATGATCATGAGAATTACAACCCCACTTGCCCACTATGCAGAGCCCCTTTGCttacttcatttttctcatcAGATTCAGAAACTTGTTCAAACTGTCTGGGTAGGATTGGGAATAAAAGAGTGATCGAAATGGCTGGAAATGCAGCGGGTGGTTTCGTAACTCGAGCATTCGACTCAATGCTCAAAGAGTGTTCTACCAAGAAGCATCCTGATTTATACAAGGCTATTCACACTTATAAAGATATCACAAAACAAGTCAATGAAGCACCCCATTCTCAGAGGACACAGGAAAGTGATGTTGGTGAAGAGGCAGAGGATGTTAAGAGTGGAAATAATATTAGTAGAGTATTGGATAATGCTGGGCAGAGTCTTGAAGGAGACGATTTAGAGCTTGTTTTAAATCCACTTCGACTTGCATTTGGGACCAAGAACTTGAAAATCCTAGACCCTGCTTTAGATTGCCTTCATAAACTCATTGCTTATGATCATTTGGAGGGAGATCCTGGCTTAGATGGTGGTATAAATGCCCCACTCTTTACAGACATTCTAAACTTGGTTTGTGCTTGCATTGACAATTCATCTCCTGACAGTACTACTGTCCAAGTCTTGAAGGTTTTTCTTACTGCTGTGGCTTCCACAAAGTTCAGAGTGCATGGCGAAGCTTTGGTGGGAGTTATGAGAGCATGCTACAATATCGCTCTTAAAAGCAAGAGTCCTATGAACCAGGCAAAATCAAAGGCAATGCTTTCACAGATCATCAGCATTATTTTCAAGAGAATGGAAGCTGATCCGGTTGAAACGACTTCATCTGGTTTTGGTGGACACACTGAGACTACTTCAGAAGCAGAGAATTTAAACACAAAATCAGGTGATGATGCTCTCAAGGATGCATCTGCAACATCTCTTGAGGAACTTCAAAATCTTGCTGCTAAACCTGATATCAAGggcttAGAGGCTATACTTGAGAAGGCGGTGCATAGTGAAGAGGGTAAAAAGATAAGACGTGGGATTGACCTGGAAAGCATGAGTATAGTACAACGTGATGCTTTATTGGTATTCCGCACTATTTGCCAGATGGGTATGAAGGAAGATAACGATGAAGTCACAACCAAGACTCGGATATTGTCTCTTGAATTTCTTCAGGGTCTGTTGGAGGGAGTTAGTCATTCATTCACAAACAATTTCCATTTCATTGACTCAGTCAAGGCATTTCTTTCTACGCAACTGGAATATTCTCGGCTCTGCTATTGCGCTTCAGGGAAAGTCTCAAAGATGGTAGAGAAAGTATGTAAGGATCCTCAGATGCTTGTGGACATATTTGTGAACTATGACTGTGATCTTGAGGCACCAAACCTGTTTCAACGAATGGTTAGTGCACTATCCAAACTAGCTCAAGGTACTCAAAATGCTGAGCCAAATTCAGTTGCTGAGTCCCAAATTGGTTCAATTAAAGGTTCATCCCTTCAAaGTCTTGTGAATGTGCTTAAATCGCTGATTGACTGGGAGAAATCACATAGATTACAAAAGTTCAGTAAGAGTAGCCACGACAAAGGGGCTTTAGATGAAGTTTCTGTTGAAAAAAGTCCTAGGGAAGATTTAACCAGTGATTTTGAGAAGACAGAAGTTCATAAATCCTCATTAGATTCCATGCAATTCTCTGGAGTGAAGTTTGACACCGCAATCCGTGAGTTCCTTACAGGGTTCCAACTTCCAGGGGAAGCTCAAGAGACAGATAGAATCATAGAAAAGTTTGCAGAGAGATATTGTGCAGATAATCCAGGTCTTTTTAAAAATGCAGATACAGCATATGTTCTTGCATATGCTGTTATTATGTTAAACACTGATGCTCATAGTCCAATGGTGTGGCCTAAAATGTCCAAGTCAGATTTTAAACACATGAATGCCATGATGAATGATGCTGAAGAATGTGCTCCTACAGAAATGCTGGAAGAGATTTATGATTCCATCGTCAAACAAGAGATTAAAATGAAAGATGAAGAAGGAGGCCTTGTCAGTATTCTTAACCTGGCTCTCCCCAGAAGAAATTCACTAGAACATTTCAAGTCTGAGAGTGAAGCCATCATTGAAAGAACAAAAGCTATTTTCAGAAATCAAGGTGTGAAAAGGGGAGTTTTTTACAGTGCTGGGCAGATTGAACTTGTAAGGCCCATGGTAGAAGCTGTTGGATGGCCTTTGCTAGCTACTTTCTCTGTAACTATGGAGGAAGGTGATAATAAGCCTCGTGTTGTTCTATGCATGGAGGGTTTTCAAGCTGGCATACATATCACATATGTTCTTGGAATGGATACCATGCGCTATGCATTTTTAACATCTCTTGTCAGGTTTACTTTCTTGCATGCTCCAAAGGAAATGCGGAGTAAAAACGTGGAAGCTCTGAGGACACTGTTGTTTTTTTGTGACTCAGACATGGATTCCCTTCAGTACACATGGAATGCAGTTCTGGAATGTGTTTCTCGCCTCGAATTTATAACCACAACTCCTTCAATATCTGTCACTGTCATGCTGGGGTCAAACCAAATCTCTAGGGAAGCAGTAGTTCAATCTCTCAGAGATTTGGCTGCAAAACCTTCTGACCAAGTGTTCTTAAATAGCGTTAAACTGCCAAGTGACTCAGTGCTGGAATTTTTCACGGCTCTTTGTGTTGTATCAGCAGAAGAACTAAAACAAACCCCAACTCGTGTCTTTAGCCTGCACAAGCTTGTTGAGATTAGCTATTATAACATGCCTCGCATTCGTCTGGTGTGGGCTAGGATATGGTCTGTTCTAGCAGCTCACTTTATATCAGCTGGGAATCATCATGATGAGAAAATTTCCATATATGCCATAGATTCTCTAAGGCAACTTGGTATGAAGTATTTGGAGCATGCAGAATTGGCCAATTTCACTTTTCAAAATGACATTCTCAAACCATTTGTTGTTCTCATACGGAACAGTCAAAGTGAATCCATAAGAAGACTAATCGTTGACTGCATCGTTCAGATGATAAAATCTAAGGTTGTAAGGATCAAGTCTGGGTGGCGTAGTGTATTCATGGTTTTTGCAGCTGCAGCGGATGATGAATTAGAATCAATTGTTGAGAGTGCATTTGAAAATGTTGAGCAGGTCATCCTAGAACATTTTGTTCAAGTAGTGAGAGAATCTTTCTTGGACTGCGTGAATTGTCTGATCAGATTTGCCAAGAGTAAAAGCTTGCTTCGTATAAGTTTGAAGGCTATCGCACTCCTTCGTATCTGCGAAGACCGTCTAGCAGAGGGTCTAAGTCCTGGAGGTGATATAAAGCCTATAGACGCCAATGTGGATGGTGCAACTTATGATGCTACTGAGTATTTTTGGTTCCCAATGCTGGCTGGTTTATCTGATTTAACCTCAGACCCGAGAGCTGAGGTCAGAAGTTGTGCTGTTGAAGTCTTATTTGATTTACTGAATGAAAGAGGCAGCAagttctcttcttcattttgggACAGAATTTTCCATCGAGTTCTGTTTCCTATTTTTGATCATGTGAGACATGATGGAAAGGAGGGCTTTAGTGATACAAGCATCCATTCACTTCAGCTCCTCTGCAACCTTTTCAATACTTTTTACAAGGAGGTGTGTTTTGTGCTGCCGCAGCTGCTGGGTTTGCTGTTAGACTGTGCCAAAAAGACAGATCAAACAGTGGTCTCAATATCTCTGGGGGCTTTGGTGCATCTCATTGAAGCTGGGGGACACCAGTTCAGTGACACTGACTGGGAAATCTCACTTAAAAGCATAAGTGAAGCTTCATACACAACACAACCCCTAGAGCTGCTTAATGCCTTGAGTTTTGAAAATCTGAGAAACCATGGAAGCATAGTTAGAAATTCTGACACCAATGCAGGTGATAATAATGTTGATGTACAATCTATTAACAGTGAGGTAGTAGTGGGAGACCTTTCACCTGATTCCAGTGGTAAAGGAAAATTTTCTACACTGGCACGCACAAAGACTATTAATTTTGCTGGACGTGAAGGTTCACTATCGCCATCGAACGGTAATCGTTCTGAAGACCCGACATCACCCTTAGGTACATCTACCAAAGGTGCAGATGCAGGAGGTCTCCAGCGGAGTCAAACATTGGGTCAACGGATTATGGGGAATATGATGGACAATCTGTTCATCAGAAATCTGACTAAGACTAAAAGCCAGCCATTAGATACTTCTCAACCATCTTCTCCAGTTAtgGCTGCTGATCCTACGGAACCTGATATCAAGAATGAGAGTCCTTTGCTAGTAACTATTAGgggcaagtgtgttacccagtTATTGCTTCTTGGAGCAATCGATGgtattcagAAGAAATATTGGAACAAGTTAAAGTTACAACAGAGGATTGCTATAATGGACACTTTGCTGTCTTTGTTGGAGTTTGCTGCTTCATATAACTCATCCATGAACCTCAGAACACGCATGAACCAAATTCCTGGTGAAAgGCCACCAGTGAATCTTCTCCGCCAGGAATCAACAGCTATTAGCATATATTTGGACATCTTGCAGAAATCAACTCTAGGAGTTGATACAGAGGAGGAGGAAAATGCTGATACTATATTGGATAATGGCTTGAGCATTTCTCAACATTCGAAGGAAGAGAGTAAACTTGTTAAAATAGCTGAGGAAAAAATGGTAACTTTGTTTGAACAGGTGCTCAATGAGGCTTCTGATCTCCAGGCTGGTGCTGGAGAAATGGCTAACATGGATATTCACCGTGTCTTGGAGCTGCGTGCTCCTGTCATTGTCAAGGTGCTTAAGAGCATGTGTAATATGAACAAGAACATTTTCAGAAGACACCTCAGAGAGCTGTATCCCTTGCTAGCAAAACTTGTATGCTGCGAACAGATTGACGTACGAGGAGCTCTGGCTGATGTGTTTCAAGCGCAAATGACAGCTCTTATACTATAG 5358 0.4087 LLIASSFFAFANLVSMGLCDVEESISGLAIGQAIYEAALIIAVLRWVFCCVSKIIKNRRHSLETPTDHHSSSCSWVCSQMIRDSTLTLRTFGEIVEKVGETEDTCAVCLNQIKMEDEVRELMNCDHVFHRECIDRWLDHDHDHENYNPTCPLCRAPLLTSFFSSDSETCSNCLGRIGNKRVIEMAGNAAGGFVTRAFDSMLKECSTKKHPDLYKAIHTYKDITKQVNEAPHSQRTQESDVGEEAEDVKSGNNISRVLDNAGQSLEGDDLELVLNPLRLAFGTKNLKILDPALDCLHKLIAYDHLEGDPGLDGGINAPLFTDILNLVCACIDNSSPDSTTVQVLKVFLTAVASTKFRVHGEALVGVMRACYNIALKSKSPMNQAKSKAMLSQIISIIFKRMEADPVETTSSGFGGHTETTSEAENLNTKSGDDALKDASATSLEELQNLAAKPDIKGLEAILEKAVHSEEGKKIRRGIDLESMSIVQRDALLVFRTICQMGMKEDNDEVTTKTRILSLEFLQGLLEGVSHSFTNNFHFIDSVKAFLSTQLEYSRLCYCASGKVSKMVEKVCKDPQMLVDIFVNYDCDLEAPNLFQRMVSALSKLAQGTQNAEPNSVAESQIGSIKGSSLQSLVNVLKSLIDWEKSHRLQKFSKSSHDKGALDEVSVEKSPREDLTSDFEKTEVHKSSLDSMQFSGVKFDTAIREFLTGFQLPGEAQETDRIIEKFAERYCADNPGLFKNADTAYVLAYAVIMLNTDAHSPMVWPKMSKSDFKHMNAMMNDAEECAPTEMLEEIYDSIVKQEIKMKDEEGGLVSILNLALPRRNSLEHFKSESEAIIERTKAIFRNQGVKRGVFYSAGQIELVRPMVEAVGWPLLATFSVTMEEGDNKPRVVLCMEGFQAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLFFCDSDMDSLQYTWNAVLECVSRLEFITTTPSISVTVMLGSNQISREAVVQSLRDLAAKPSDQVFLNSVKLPSDSVLEFFTALCVVSAEELKQTPTRVFSLHKLVEISYYNMPRIRLVWARIWSVLAAHFISAGNHHDEKISIYAIDSLRQLGMKYLEHAELANFTFQNDILKPFVVLIRNSQSESIRRLIVDCIVQMIKSKVVRIKSGWRSVFMVFAAAADDELESIVESAFENVEQVILEHFVQVVRESFLDCVNCLIRFAKSKSLLRISLKAIALLRICEDRLAEGLSPGGDIKPIDANVDGATYDATEYFWFPMLAGLSDLTSDPRAEVRSCAVEVLFDLLNERGSKFSSSFWDRIFHRVLFPIFDHVRHDGKEGFSDTSIHSLQLLCNLFNTFYKEVCFVLPQLLGLLLDCAKKTDQTVVSISLGALVHLIEAGGHQFSDTDWEISLKSISEASYTTQPLELLNALSFENLRNHGSIVRNSDTNAGDNNVDVQSINSEVVVGDLSPDSSGKGKFSTLARTKTINFAGREGSLSPSNGNRSEDPTSPLGTSTKGADAGGLQRSQTLGQRIMGNMMDNLFIRNLTKTKSQPLDTSQPSSPVMAADPTEPDIKNESPLLVTIRGKCVTQLLLLGAIDGIQKKYWNKLKLQQRIAIMDTLLSLLEFAASYNSSMNLRTRMNQIPGERPPVNLLRQESTAISIYLDILQKSTLGVDTEEEENADTILDNGLSISQHSKEESKLVKIAEEKMVTLFEQVLNEASDLQAGAGEMANMDIHRVLELRAPVIVKVLKSMCNMNKNIFRRHLRELYPLLAKLVCCEQIDVRGALADVFQAQMTALIL 1785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2994 1785 ProSiteProfiles Zinc finger RING-type profile. 105 154 IPR001841 -
Sto4g2994 1785 PANTHER BREFELDIN A-INHIBITED GUANINE NUCLEOTIDE-EXCHANGE PROTEIN 5 561 687 - -
Sto4g2994 1785 Gene3D - 911 1427 IPR011989 -
Sto4g2994 1785 Pfam Sec7 domain 678 801 IPR000904 GO:0005085|GO:0032012
Sto4g2994 1785 Pfam Ring finger domain 103 154 IPR001841 -
Sto4g2994 1785 MobiDBLite consensus disorder prediction 1473 1509 - -
Sto4g2994 1785 MobiDBLite consensus disorder prediction 1534 1556 - -
Sto4g2994 1785 PANTHER BREFELDIN A-INHIBITED GUANINE NUCLEOTIDE-EXCHANGE PROTEIN 5 687 1780 - -
Sto4g2994 1785 PANTHER BREFELDIN A-INHIBITED GUANINE NUCLEOTIDE-EXCHANGE PROTEIN 5 188 549 - -
Sto4g2994 1785 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 687 1780 - -
Sto4g2994 1785 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 561 687 - -
Sto4g2994 1785 SMART ring_2 105 153 IPR001841 -
Sto4g2994 1785 MobiDBLite consensus disorder prediction 407 433 - -
Sto4g2994 1785 SUPERFAMILY ARM repeat 267 1210 IPR016024 -
Sto4g2994 1785 Pfam C-terminal region of Mon2 protein 1254 1318 IPR032817 -
Sto4g2994 1785 Gene3D - 692 813 IPR023394 -
Sto4g2994 1785 Pfam BIG2 C-terminal domain 1572 1777 IPR046455 -
Sto4g2994 1785 Pfam Domain of unknown function (DUF1981) 1098 1180 IPR015403 -
Sto4g2994 1785 ProSiteProfiles SEC7 domain profile. 628 799 IPR000904 GO:0005085|GO:0032012
Sto4g2994 1785 CDD Sec7 687 801 IPR000904 GO:0005085|GO:0032012
Sto4g2994 1785 SUPERFAMILY ARM repeat 926 1777 IPR016024 -
Sto4g2994 1785 Pfam Dimerisation and cyclophilin-binding domain of Mon2 205 403 IPR032629 -
Sto4g2994 1785 MobiDBLite consensus disorder prediction 235 249 - -
Sto4g2994 1785 MobiDBLite consensus disorder prediction 228 252 - -
Sto4g2994 1785 MobiDBLite consensus disorder prediction 409 433 - -
Sto4g2994 1785 SUPERFAMILY Sec7 domain 680 809 IPR035999 GO:0005085|GO:0032012
Sto4g2994 1785 SUPERFAMILY RING/U-box 99 160 - -
Sto4g2994 1785 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 188 549 - -
Sto4g2994 1785 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 160 IPR013083 -
Sto4g2994 1785 CDD RING-H2_PA-TM-RING 104 154 - -
Sto4g2994 1785 MobiDBLite consensus disorder prediction 1534 1548 - -
Sto4g2994 1785 SMART sec7_5 616 801 IPR000904 GO:0005085|GO:0032012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2994 Sto-Chr4 30256360 30267570 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2994 26 168 C3H Transcription Factor Family AT3G43430 43.624 3.06e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2994 K13462 - gmx:100794995 2198.32