Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2987 ATGGCTCTTTCCTCCACTTCATTcaccttcttctctttctccatCCTGATTCTTGCTCTCTCCACCCCGTTTGCTGCTGCCGTGGATAATGTGGTGGGCTCAGAGTGCTTGAAGGTCTCGTCTTCGGAATTCGTCGGCTCTGTCAGAACAGTCATCGATGTCCTTCAACAAGTCACCTCCATTTTGTCCAATTTCGGCAGCGTTTTTGGAGATTCTCGTGTCTCGAACGCAGTTTCCGACTGCCTCGATTTGCTTGACTTGTCTTCTGATGAACTCTCATGGTCTGCTTCTGCCACTCAGACTCCCAAAGGCAAGCATAACAGTACTGGAAACCTGAGCTCCGACTTGCGGACATGGCTAAGTGCTGCACTTGCGAATCCCCAAACATGCATGGACGGATTTGAAGGCACCAACAGCTTAGTGAAGGGACTCATATCAAGTGGGCTCGGAGAAATGACGTCTCTGCTGCAGCAGCTGCTGACCCAGGTGCACCCTGTTTCGGACTCATTCGTGAGTAGCAGAAAGAGCGGATTTCCTTCGTGGGTGAAGCCAAGAGAGCGAAAGATGCTGCAAGCAAATGGTGGGGTGGTGGCAGATGTGGTGGTAGCCATGGATGGCACTGGAAATTTCAAGAAGGTGATGGATGCAGTGGCTGCGGCTCCTGATTATAGCATGAAACgatttgtgatatatataaaaaagggaGTATACAATGAGAACGTGGAgatcaagaagaagaagtggaACCTCATGATGATTGGAGATGGTATGAATGCCACTATTATCTCCGGCAACCGCAGCTTCGTCGACGGTTGGACCACCTTCCGGTCTGCTACTTTTGCTGTGAGTGGAAGAGGGTTCATAGCACGTGACATATCCTTCCAGAACACTGCGGGCCCCGAGAAGCACCAAGCAGTGGCTCTACGATCCGACTCTGACCTCTCTGTTTTTTACCGATGTGGGATTTGGGGATACCAAGACAGCCTCTACACTCACACCATGAGACAATTCTTCAGAGAATGCAGAATTAGTGGAACTGTGGATTTCATCTTCGGTGATGCCACTGCCGTATTCCAAAGCTGCGTTTTACTCCCAAAAAAAGGCTTACCAAATCAAAAGAACACCATCACAGCACAGGGAAGAAAAGACCCTAATGAACCCACTGGTTTCTCCTTCCAATTCTGCAATGTGACTGCAGATTCAGATCTCCTACCCTCAGTGAATTCCACTCAGACATACCTTGGAAGGCCATGGAAGACGTATTCAAGAACCATTTTCATGCAGTCTTATATGAGTGATGTGTTGAGGCCAGAAGGATGGTTGGAGTGGAATGGGGATTTTGCTTTGGACACATTGTATTATGCAGAGTATATGAATAGTGGACCAGGAGCTGCATTAGGGAAAAGAGTGAAATGGAAAGGGTATCAAGCTTTGAATGATTCTAATCAAGCTACTAATTTCACTGTGGCTCAATTTATTGAGGGGAATCTCTGGTTACCTTCTACGGGAGTGACTTACACtgcaggatttggggtttaa 1539 0.4548 MALSSTSFTFFSFSILILALSTPFAAAVDNVVGSECLKVSSSEFVGSVRTVIDVLQQVTSILSNFGSVFGDSRVSNAVSDCLDLLDLSSDELSWSASATQTPKGKHNSTGNLSSDLRTWLSAALANPQTCMDGFEGTNSLVKGLISSGLGEMTSLLQQLLTQVHPVSDSFVSSRKSGFPSWVKPRERKMLQANGGVVADVVVAMDGTGNFKKVMDAVAAAPDYSMKRFVIYIKKGVYNENVEIKKKKWNLMMIGDGMNATIISGNRSFVDGWTTFRSATFAVSGRGFIARDISFQNTAGPEKHQAVALRSDSDLSVFYRCGIWGYQDSLYTHTMRQFFRECRISGTVDFIFGDATAVFQSCVLLPKKGLPNQKNTITAQGRKDPNEPTGFSFQFCNVTADSDLLPSVNSTQTYLGRPWKTYSRTIFMQSYMSDVLRPEGWLEWNGDFALDTLYYAEYMNSGPGAALGKRVKWKGYQALNDSNQATNFTVAQFIEGNLWLPSTGVTYTAGFGV 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2987 512 PANTHER PECTINESTERASE 173 510 - -
Sto4g2987 512 PANTHER PECTINESTERASE 38 168 - -
Sto4g2987 512 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 173 510 - -
Sto4g2987 512 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 38 168 - -
Sto4g2987 512 ProSitePatterns Pectinesterase signature 2. 343 352 IPR033131 -
Sto4g2987 512 Pfam Plant invertase/pectin methylesterase inhibitor 58 154 IPR006501 GO:0004857
Sto4g2987 512 SMART PMEI_2 27 159 IPR006501 GO:0004857
Sto4g2987 512 CDD PMEI-like_4 16 167 - -
Sto4g2987 512 SUPERFAMILY Pectin lyase-like 198 509 IPR011050 -
Sto4g2987 512 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 48 152 IPR035513 -
Sto4g2987 512 Gene3D - 196 511 IPR012334 -
Sto4g2987 512 Pfam Pectinesterase 199 496 IPR000070 GO:0030599|GO:0042545
Sto4g2987 512 ProSitePatterns Pectinesterase signature 1. 224 243 IPR018040 -
Sto4g2987 512 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 164 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2987 Sto-Chr4 30207164 30209942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2987 10 510 Carbohydrate Esterase AT3G43270 63.619 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2987 K01051 - gmx:100777500 779.245