Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2972 ATGGATGACAGCGGTGGCCCCAAACTGACAGGAATCAGACAGATTGTGAGACTAAAGGAAATACTTCAGAAGTGGCAATCAGTCACCTTGGGCTCAAAAGTGAACAGTCAACCTTCTGATATGTGTCATGGGAGCATATCACCAATAATAAACAGAAGGCTAACGAATGTTAAGTATTGTGATTCGGATGAAGATGGCTGCCAAAGCCCTGAGCCGCCACATGATGTTCCCAAAGGCTATTTGGCAGTATATGTAGGACCAGAGCTTCGGAGGTTCATCATTCCCACCAGCTACCTTAGTCACCCTCTATTCAAAGTGTTGTTGGAAAAGACTGCAGAGGAATTTGGGTTTGAGCAAAGTGGCGGACTTACAATCCCATGCGAGATTGAGACCTTTAAGTTCCTCCTAAACTACATGGAGAACAACAACCAGAAGGATCAAAATGATGAAAGCTCCTGCAGAAACTCGGAAGAAGACTAA 480 0.4458 MDDSGGPKLTGIRQIVRLKEILQKWQSVTLGSKVNSQPSDMCHGSISPIINRRLTNVKYCDSDEDGCQSPEPPHDVPKGYLAVYVGPELRRFIIPTSYLSHPLFKVLLEKTAEEFGFEQSGGLTIPCEIETFKFLLNYMENNNQKDQNDESSCRNSEED 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2972 159 Pfam Auxin responsive protein 62 137 IPR003676 GO:0009733
Sto4g2972 159 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 147 IPR003676 GO:0009733
Sto4g2972 159 PANTHER SMALL AUXIN-UP RNA-RELATED 7 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2972 Sto-Chr4 30106092 30106734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2972 1 154 Calmodulin-binding Proteins AT5G20810 68.153 7.24e-72 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2972 K14488 - gmx:100795275 240.736