Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2966 ATGGGTGTCGGAGGAAATTTCTGGGATTTGCTAAAGCCATATGCGCGAGCTGAAGGTTTTGATTTCTTAAGGAACAAGCGCGTTGCCGTAGACCTTTCCTTCTGGATTGTCCAGCATGAGAATGCCATCAAGGCCCATGCTCTCAAACCTCACCTCCGCCTTACCTTCTTTCGCACCATCAATCTCTTCTCCAAGTTTGGAGCTTTTCCAGTCTTCGTTGTGGATGGGACCCCATCGTTGTTGAAATCACAGGCCAGGATCACAAGATTTTACCGTTCTTCCGGCATTGAACTAAGTAGCTTGCCGGTGGCTGATGGTGTTCCGGTTGAGAGGAACCCTGTATTTTCAAGATATGTTCAAGAATGTGTGGAACTTCTTGAGCTACTTGGAATTCCTGTACTAAATGCCAAAGGAGAGGCAGAAGCACTCTGTTCCCAATTAAATAGTGAAGGTCATGTAGATGCTTGCATCACAGCTGATAGTGATGCATTCCTCTTTGGCGCCAAATGCATTATAAAAAGCTTCTGCCCCAATTCCAAAGAACCGTTTGAATGCTACAATATGTCAGACATTGAAGCTGGTCTTGGGTTGAAGAGGAAACACTTCATAGCTATCTCTCTTCTCATTGGAAATGATCATGATTTAAAGGGTGTTCAAGGGATTGGACTTGATACTGCTCTTCGTTTTGTTAAATCTTTTAGTGAAGAAGATGTATTGAATAGATTACATGAGATTGGCAATGGGAAATTTTCACCATTTCCCACCAGCATTAAATCTGCAGACAATTGTGCTGACATGGACGGGAACTCCTCAAGCAGAAAACAACTTCACTGTTCCTTCTGTGGGCATCCAGGCAGCAAAAGAGACCATATGAAATTTTCCTGTGGATATTGCATtacagatgatgatgaaggttgCATTAGAAAACCAGAGGGTTTTACTTGTGCTTGCCTCTCCTGCGACATGGTTAGGAAACAGAAGGGACAGAAAAGGCTGGAAGATTGGTATACAAAAATTTGTCATAAGATTGCGGAGGAGCCAAAATTTCCCAGAGATGAAATTATTGAAATGTATTTATGCAATGACAATGGTTGTTTTCCTGCAAGTGATGGCCCTTGCATCTCATGGGGAAGACCCAAGATTGAGTTTCTGATAGATTTTTTAAACTTTCATCTGCGCTGGGGTCCATTTTACACTCGACGGCAGATTTTTCCTATGATGTCTACCATCTTTCTGAGAGATGTGGCTAATAATCCTGTAGAAAATTTGTTACTTGAAAAATATGAGTTTGATTCAATCAAACGTGTGAAGGTAAGATATGGTTATCAATTTTATGTCATCAATTGGAAATGTGTAGTTGGCAACGTTATCTGTACAATTCCACCACATGAATCTGGCATGCAACAAGAAGATGAGGTTGAGCTTGATGAATTTGTTGATCTACTGGATGACTCTGATATTCCTGAGGTTAATGCGGGTGATGGATGTAGCTTTCTGTTGACTGATGAAAATATGGAACTTGTAAAGGCTGCTTTTCCAGCTGAAGTTGAAAGATTTTTGCAGGAACAGGAAATGAAggaattgaaaaaaagaaagaattcaaCCCCAAGATCTCAAGTGATtgaacattcatcatcatcatcctcaaGAAATATTCAACTTAATATTACAGAGTTCTTCCGTTCAACAAAAATGCAAAATCGCTCAAAACAGGAAGAGCAATCTAAGAACTCTGATATCCTAGATGGTGGCACtacaaaaggaaaaagagaagcaTCAAGTCCAAATCTTTCAAAATCTGTGAGGCGTCGCCTTTTGTTTAACTAG 1827 0.3886 MGVGGNFWDLLKPYARAEGFDFLRNKRVAVDLSFWIVQHENAIKAHALKPHLRLTFFRTINLFSKFGAFPVFVVDGTPSLLKSQARITRFYRSSGIELSSLPVADGVPVERNPVFSRYVQECVELLELLGIPVLNAKGEAEALCSQLNSEGHVDACITADSDAFLFGAKCIIKSFCPNSKEPFECYNMSDIEAGLGLKRKHFIAISLLIGNDHDLKGVQGIGLDTALRFVKSFSEEDVLNRLHEIGNGKFSPFPTSIKSADNCADMDGNSSSRKQLHCSFCGHPGSKRDHMKFSCGYCITDDDEGCIRKPEGFTCACLSCDMVRKQKGQKRLEDWYTKICHKIAEEPKFPRDEIIEMYLCNDNGCFPASDGPCISWGRPKIEFLIDFLNFHLRWGPFYTRRQIFPMMSTIFLRDVANNPVENLLLEKYEFDSIKRVKVRYGYQFYVINWKCVVGNVICTIPPHESGMQQEDEVELDEFVDLLDDSDIPEVNAGDGCSFLLTDENMELVKAAFPAEVERFLQEQEMKELKKRKNSTPRSQVIEHSSSSSSRNIQLNITEFFRSTKMQNRSKQEEQSKNSDILDGGTTKGKREASSPNLSKSVRRRLLFN 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2966 608 Pfam XPG N-terminal domain 1 93 IPR006085 GO:0004518
Sto4g2966 608 SMART xpgn3 1 96 IPR006085 GO:0004518
Sto4g2966 608 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 197 413 IPR036279 -
Sto4g2966 608 Pfam XPG I-region 130 212 IPR006086 GO:0004518
Sto4g2966 608 PANTHER FLAP ENDONUCLEASE GEN-LIKE 1 1 596 - -
Sto4g2966 608 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 25 39 IPR006084 -
Sto4g2966 608 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 70 89 IPR006084 -
Sto4g2966 608 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 126 143 IPR006084 -
Sto4g2966 608 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 147 167 IPR006084 -
Sto4g2966 608 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 202 217 IPR006084 -
Sto4g2966 608 MobiDBLite consensus disorder prediction 527 549 - -
Sto4g2966 608 Gene3D - 197 259 - -
Sto4g2966 608 Gene3D - 5 196 - -
Sto4g2966 608 SMART xpgineu 127 197 IPR006086 GO:0004518
Sto4g2966 608 SUPERFAMILY PIN domain-like 6 212 IPR029060 -
Sto4g2966 608 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 596 IPR006084 -
Sto4g2966 608 CDD PIN_GEN1 2 201 - -
Sto4g2966 608 MobiDBLite consensus disorder prediction 564 608 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2966 16 244 Core DNA Replication Machinery Family AT5G26680 28.400 5.30e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2966 K15338 - gmx:100791251 850.506