Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2965 atgGTGAAGAAGCACGAAATGGAAAATGTTGCGAGTGAGGAGCGAAACGAAGGATCACACAAGTACAAAGGTGTGCGAAAGAGAAAGTGGGGGAAATGGGTGTCTGAAATTAGACTTCCCAACAGTAGGGAGAGGATTTGGTTGGGATCGTACGACACCGCCGAGAAGGCGGCGCGTGCATTCGACGCCGCCATGTTTTGCTTACGTGGCCGCAACGCCAGGTTTAATTTCCCCGACAACCCGCCGGACATCGCCGGCGGGAGGAGTCTCACGCCGTCGCAGATTCAGCTCGCCGCCGCGCGTTTTGCGAATGCGGAGGAGCCTCGCCACAACCACACGACGTCGtaccaccacccatcatcccTCTCGCTCTCTCACTCTGCCTCTTCGTCTACTACACTATTACCAGTGGAGTCTCAGTCTCGGTCGGATAGTGACGTCACTCTAAACGGTTCGTTTCCGGATTTGTTTACGGCAATGGGCAATTCGGGTAATTACGCATCCGATTATGGGATATTTCCGGGTTTTGATGATCTGAACAATAGCGATTTCTACACACCGGAAATGCCGAGGGATGATGATTACGGAGAAGAACACGTGGATGGGCACGTGGGTCAGGACTCTTTCTTGTGGAATTTCTAA 642 0.5093 MVKKHEMENVASEERNEGSHKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTAEKAARAFDAAMFCLRGRNARFNFPDNPPDIAGGRSLTPSQIQLAAARFANAEEPRHNHTTSYHHPSSLSLSHSASSSTTLLPVESQSRSDSDVTLNGSFPDLFTAMGNSGNYASDYGIFPGFDDLNNSDFYTPEMPRDDDYGEEHVDGHVGQDSFLWNF 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2965 213 MobiDBLite consensus disorder prediction 108 146 - -
Sto4g2965 213 Gene3D AP2/ERF domain 20 79 IPR036955 GO:0003700|GO:0006355
Sto4g2965 213 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Sto4g2965 213 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Sto4g2965 213 SUPERFAMILY DNA-binding domain 21 79 IPR016177 GO:0003677
Sto4g2965 213 MobiDBLite consensus disorder prediction 115 146 - -
Sto4g2965 213 Pfam AP2 domain 21 70 IPR001471 GO:0003700|GO:0006355
Sto4g2965 213 ProSiteProfiles AP2/ERF domain profile. 21 78 IPR001471 GO:0003700|GO:0006355
Sto4g2965 213 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 9 213 - -
Sto4g2965 213 MobiDBLite consensus disorder prediction 1 21 - -
Sto4g2965 213 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF017 9 213 - -
Sto4g2965 213 MobiDBLite consensus disorder prediction 1 22 - -
Sto4g2965 213 SMART rav1_2 21 84 IPR001471 GO:0003700|GO:0006355
Sto4g2965 213 CDD AP2 21 80 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2965 Sto-Chr4 30022483 30023124 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2965 21 213 AP2-EREBP Transcription Factor Family AT1G19210 52.000 2.27e-60 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto4g2965 AP2 4.3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2965 - - gmx:732656 252.677