Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2944 ATGGATACTTTTTTGATGTCATATTTCAATCGTTTCAGAAGTTCAGCTAATTCATTCCTATCTCAATACGAACCTattgttcttcttctttctcctctTGTTGCTCTCCTTCTCGCCAACACAATATCATCGTTTTTTCAGCTCGTTCATGATAAAGGACTTAAACAAACGCTACTAGGGTTTCTCATCAACTCTGTCaaATTGATCCCTGGTGTGAAAAGGTACATCGATGCCGAAAAGCAAAAGGTTGTGAATAAGTTGCAGTCTGACGTTAAGTCTAAAAAAGAAGGTTGGAGAACAGATTTGCCAAGGGCAGGACTAGGGATGGAAGTTATTGAGAAAATGAGACATGAGAAAAGCAAGGATGTGATTTGGCAGGGCAAATGCTCTGGTACAGTCTACATTGGAGGAAGTGAATATGATGCACACTTTTCCTTGATAAATGAGGCATGCTCAATGTTAGTAAGACATGTCAGAGCTCTGGGTCATCCCATCTTGACTACTATTATCAGATTCTGTACTTTTTGGTTAGACCAATCTGGCATTTGGAACAGTCTGACAAGACCTAAGGCTCTTTCTCATTTGCTTAAACTTGAAAAAGTGGTTGCAATGACAGCTGCACTTCTTGGAAGTAAAGGAAAGAGTTCTGGGGGACAAATATGTGGAAATATGACATCGGGGGGGACTGAAAGTATATTATTAGCTGTTAAGTCATCTCGTGACTATATGAAGTCTAAGAAAGGAATTACAAGACCCGAAATGATAATACCTGAGTCTGCACATTCCGCTTATGACAAGGCTGCACAATATTTTAATATCAAACTGTGGCGTGTCCCAGTTAACAAAAGCTTTCAAGCAGATCCAAAAGCAATTCGACAGCGTATTAACAAAAATACAATCTTGATTGTTGGTTCTGCCCCTGGGTTTCCTCATGGAATAATTGACCCTATTGAAGAACTTGGTGATCTGGCATCAAGCTTTGGAATTTGTTTTCACGTTGACCTTTGTCTTGGTGGCTTTGTATTACCTTTTGCTCGTGAACTTGGgtACCCTATTCCACCTTTTGATTTCTCTGTTAAAGGAGTCTCTTCAATATCAGTGGATGTGCATAAATATGGTTTAGCTCCTAAAGGAACAAGTATAGTACTATACAGGAATCATGAAATCAGAAAGGTTTTTCAATATGCCAATGCTGATTTAGCACATTTAAGAAGAACAGGGAAGAGAGATAAGAAAAGGCGTATTGAAGTTACTGAGTGGTCTGGTGGGTTATATGTGTCTCCAACCATAGCTGGAAGCAGGCCTGGAGGTCTTATTGCTGGGGCTTGGGCAGCAATGATGTCTTTAGGGCAAGAAGGTTACCTGGAGAATACAAAAGCAATTATGGATGTTTCAAAAAGAATACAGAAAGGCATAAGTGAAATTCCTGAATTGTTCATCGTTGGAAGACCAGACATGACAATTGTGGCATTTGGATCCGATGTTGTGGACATATTTGAAGTTAATGATATCTTGTCCTCCCGAGGGTGGCATTTAAATGCATTGCAGAGACCTAACAGCATCCATATCTGTGTGACACTGCAGCATGTGGCGGTTGTTGAAGACTTTCTCAGGGATTTGAAGGAATCAGTGATAACTGTGAAAGAAAATCCAGGACCAATAAGTGGAGGGTCAGCACCTATATATGGTGCCGCAGGGAAGATGCCAGATAGAGGTATGGTCCAGGAATTGTTGGTAGATTTCATGGATGGTACCTGCTAG 1761 0.3998 MDTFLMSYFNRFRSSANSFLSQYEPIVLLLSPLVALLLANTISSFFQLVHDKGLKQTLLGFLINSVKLIPGVKRYIDAEKQKVVNKLQSDVKSKKEGWRTDLPRAGLGMEVIEKMRHEKSKDVIWQGKCSGTVYIGGSEYDAHFSLINEACSMLVRHVRALGHPILTTIIRFCTFWLDQSGIWNSLTRPKALSHLLKLEKVVAMTAALLGSKGKSSGGQICGNMTSGGTESILLAVKSSRDYMKSKKGITRPEMIIPESAHSAYDKAAQYFNIKLWRVPVNKSFQADPKAIRQRINKNTILIVGSAPGFPHGIIDPIEELGDLASSFGICFHVDLCLGGFVLPFARELGYPIPPFDFSVKGVSSISVDVHKYGLAPKGTSIVLYRNHEIRKVFQYANADLAHLRRTGKRDKKRRIEVTEWSGGLYVSPTIAGSRPGGLIAGAWAAMMSLGQEGYLENTKAIMDVSKRIQKGISEIPELFIVGRPDMTIVAFGSDVVDIFEVNDILSSRGWHLNALQRPNSIHICVTLQHVAVVEDFLRDLKESVITVKENPGPISGGSAPIYGAAGKMPDRGMVQELLVDFMDGTC 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2944 586 Gene3D Aspartate Aminotransferase, domain 1 451 540 IPR015422 GO:0003824
Sto4g2944 586 Gene3D - 200 450 IPR015421 GO:0003824
Sto4g2944 586 PANTHER - 21 155 - -
Sto4g2944 586 PANTHER - 189 586 - -
Sto4g2944 586 SUPERFAMILY PLP-dependent transferases 165 547 IPR015424 -
Sto4g2944 586 Pfam Pyridoxal-dependent decarboxylase conserved domain 202 491 IPR002129 GO:0016830|GO:0019752|GO:0030170
Sto4g2944 586 Gene3D - 541 585 - -
Sto4g2944 586 PANTHER SPHINGOSINE-1-PHOSPHATE LYASE 1 189 586 - -
Sto4g2944 586 PANTHER SPHINGOSINE-1-PHOSPHATE LYASE 1 21 155 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2944 200 545 Calmodulin-binding Proteins AT5G17330 26.230 1.54e-22 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2944 K01634 - gmx:100794743 847.04