Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2936 ATGGCCTTAGAGCAGCAGTTATCATTAGGGCCAAATCCGAACCCCCTTGACGGCGGAACTGACGGAAAAAACGCCGGAGACGATAGCAGCAAGGCGCCGAGACTGCCTCGATGGACCAGGCAGGACATTCTCGTCCTCATACAGGGAAAGCGAGACGCGGAGAATCGGTTTCGGAGGGGGCGCGTCGCGGGGCTGCCATTCGGGTCGGGTCAGATTGAGCCGAAATGGGCATCGGTTTCGTCCTACTGCAAAAAGCACGGAGTGAACAGAGAGCCGGTGCAGTGTCGCAAGAGGTGGAGCAATTTGGCGGGAGACTACAAGAAGATAAAGGAATGGGAGTCTCAGATGAGGGACGAGACGGAATCTTATTGGGTCCTGAGGAACGATTTAAGGAGGGAGAGGAAATTGCCAGGGTTTTTCGATAAGGAGGTGTATGATATACTTGAGTCAGGATCGCAGACGCCGGCGTTGGTGGTAGCTCTGGCATCGGCTCCGGCGAGTGTGACAACGGAGACGGTGAATAAGGGGAAGGACGACGGAGGGGGAGTGGCGGCGGAGGAAGCTGAGGTGGATATAGAGCAACACCTGTACGACAGTAATCGGAGCGCCGCCGTGGAGGATGGTTTGTTCTCAGATTTTGAACAAGAAGAGGTGTATGCAAGTTCGGAGAAGGAGGCGGCAGCGAAGACAGACGTTTCAGCGCCCACAACTGTTATTCCTGCGCCTATTAATATCTCAGccattgttttattttgtgtaggttGTACGGATGAGAAACAGCCAGCCTCAAATCCAGAAGTGGGTTCTACATCTCAAGGAGGAAGAAAGAGGAAACGGTTTGGAAGAGATGGAGAGGAGGAAACTTTGGAATATCAATTAATTGATGTGTTGGAAAGAAATGGGAAAATGCTAAACTCGCAGCTCGAAACTCAGAATAAAAATCTGAGGTTGGATCGTGAGCAGCGGAAAGACCAGACAAGTAACTTAGTTGCTGTTCTTGATAAACTTGCAGATGCTCTAGCCAGAATTGCTGATAAGCTTTAG 1044 0.5029 MALEQQLSLGPNPNPLDGGTDGKNAGDDSSKAPRLPRWTRQDILVLIQGKRDAENRFRRGRVAGLPFGSGQIEPKWASVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESQMRDETESYWVLRNDLRRERKLPGFFDKEVYDILESGSQTPALVVALASAPASVTTETVNKGKDDGGGVAAEEAEVDIEQHLYDSNRSAAVEDGLFSDFEQEEVYASSEKEAAAKTDVSAPTTVIPAPINISAIVLFCVGCTDEKQPASNPEVGSTSQGGRKRKRFGRDGEEETLEYQLIDVLERNGKMLNSQLETQNKNLRLDREQRKDQTSNLVAVLDKLADALARIADKL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2936 347 Pfam Myb/SANT-like DNA-binding domain 37 124 IPR044822 -
Sto4g2936 347 ProSiteProfiles Myb-like domain profile. 37 103 IPR001005 -
Sto4g2936 347 MobiDBLite consensus disorder prediction 260 283 - -
Sto4g2936 347 MobiDBLite consensus disorder prediction 1 36 - -
Sto4g2936 347 Gene3D - 38 108 - -
Sto4g2936 347 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 19 347 - -
Sto4g2936 347 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 19 347 - -
Sto4g2936 347 Coils Coil 294 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2936 Sto-Chr4 29829166 29831667 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2936 22 134 Trihelix Transcription Factor Family AT1G13450 31.034 1.10e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sto4g2936 Myb_DNA-bind_4 4.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2936 - - vra:106771947 427.557