Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2910 ATGCAATGCTCAGGAATACATCGAAGTCTCGGTGTACATATTTCAAAGGTTCGCTCTGCAACTCTGGACACCTGGCTTCCAGAGCAGGTTGCATTCATTCAATccATGGGAAATGAGAAAGCTAATAGTTACTGGGAAGCAGAGTTACCACCAAATTATGATAGAGTTGGAATCGAGAACTTCATTCGGGCAAAATATGAAGAGAAGAGATGGCTTCCAAGGGATGGAAAACCGAAGTCACCTTCTAGACAGCAGGAAGAGAGGACACCATATTGGCAGAGGCATACAGAAAGAACTGGGCATGGTTATGCACCTACTTCTGAGAACACTTCtcatgaaaggaaaagaaatcagCCATCAAATGCAATTCCTGCCACAAGGATTAGTGCTCCTGCTCCTCCAAAAGTACCTGAGCagGTAACTCCTCTTACAAAACCTCAGCATGTAGAGAAAGCGGAGCCAGCGGCACCAGAACCGCAGGTTGAAACAACTAAACAGGCTACTGTCATGGATCAGAATACTCCTCCAAAAGTTGACTATGCTACAGACCTTTTCAACATGTTGTCCATGGATGGCCCAAGCGAAAATAACTCGGAGGAAGCTGGTTCTGGTGCTAGTGATAATAATAACTGGGCAGGTTTTCAGTCCGCTGCAGAAGTATCAACAGCTGAGAAGTCTGGTTCCACAAAAGCAGTTGAGAGCACACCCCAGTCAAATTCTGGAATTGAGGATCTATTTAAAGATTCACCTTCATTGATACCTGTAGCTCCAGACAAACCACAAAAAGATTTGAAAGGCGATATCATGAGCCTCTTTGAGAAGTCCAATATGGtctctccattttctatgcaTCAGCAGCAGCTTGCCATGCTGGCACAGCAACAGTCCCTTCTAATGGCTGCTGCAGCTAACTCTACTGGTGGGAACCCAAGGTTTCCTGGTAGTGTACCACAACCTGGACTGAATGGGTCCAATATTCCTGTCCCAAGTTGGCCAGCTGCTGGCTACTCAGTTCCTGGGGTATTGCCCATGGGTGGTCCGGGAGAGCTGCAGAAACTTATGCAGATCCGTAATGACCAACTTTTCGTTTGTGGTTTCAGTTTGTATACATTGGGACAGGTTAATCCAATTAATGGTATGACCACAACAACAGGAGTCAGTAAACCACAGTCAGCAGCTACTACAGTGTCATCATCAACCTCTACACAGGCAACTAAAGATGATTTCTCCTCTTTAATACAAGGCATGTTTGCCAAACACTGA 1263 0.4402 MQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRAKYEEKRWLPRDGKPKSPSRQQEERTPYWQRHTERTGHGYAPTSENTSHERKRNQPSNAIPATRISAPAPPKVPEQVTPLTKPQHVEKAEPAAPEPQVETTKQATVMDQNTPPKVDYATDLFNMLSMDGPSENNSEEAGSGASDNNNWAGFQSAAEVSTAEKSGSTKAVESTPQSNSGIEDLFKDSPSLIPVAPDKPQKDLKGDIMSLFEKSNMVSPFSMHQQQLAMLAQQQSLLMAAAANSTGGNPRFPGSVPQPGLNGSNIPVPSWPAAGYSVPGVLPMGGPGELQKLMQIRNDQLFVCGFSLYTLGQVNPINGMTTTTGVSKPQSAATTVSSSTSTQATKDDFSSLIQGMFAKH 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2910 420 CDD ArfGap 1 66 - -
Sto4g2910 420 PANTHER ARF GTPASE ACTIVATOR 1 419 - -
Sto4g2910 420 SMART arf_gap_3 2 79 IPR001164 GO:0005096
Sto4g2910 420 SUPERFAMILY ArfGap/RecO-like zinc finger 1 73 IPR037278 -
Sto4g2910 420 Gene3D Arf GTPase activating protein 1 79 IPR038508 -
Sto4g2910 420 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 419 IPR044520 GO:0005096
Sto4g2910 420 Pfam Putative GTPase activating protein for Arf 2 72 IPR001164 GO:0005096
Sto4g2910 420 MobiDBLite consensus disorder prediction 189 260 - -
Sto4g2910 420 ProSiteProfiles ARF GTPase-activating proteins domain profile. 1 79 IPR001164 GO:0005096
Sto4g2910 420 MobiDBLite consensus disorder prediction 383 404 - -
Sto4g2910 420 MobiDBLite consensus disorder prediction 189 245 - -
Sto4g2910 420 MobiDBLite consensus disorder prediction 72 95 - -
Sto4g2910 420 MobiDBLite consensus disorder prediction 72 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2910 Sto-Chr4 29653494 29657055 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2910 1 72 C2H2 Transcription Factor Family AT4G05330 47.500 7.60e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2910 K12486 - gmx:100780452 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2910 4 29653494 29657055 Sto4g2910 4 29653494 29657055 ECH