Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2885 ATGGGAGTTCCTGAGATAGACCCGCTTTCGCAACTCAGTTTACCACCGGGTTTTCGGTTTTACCCGACGGACGAGGAGCTTCTGGTTCAGTATCTTTGCCGGAAAGTCGCCGGTCATCATTTCTCTCTGCAAATCATCGCTGAAATCGACTTGTACAAGTTCGACCCATGGGTCTTACCAAGTAAAGCCATTTTCGGTGAGAAAGAATGGTACTTTTTCAGCCCAAGGGACCGGAAGTACCCGAATGGATCTCGACCCAACAGAGTAGCTGGGTCGGGTTACTGGAAAGCCACCGGAACCGACAAAATCATCACCACGGAAGGGAGAAAAGTTGGCATAAAGAAAGCTCTGGTTTTCTATGTAGGAAAAGCGCCTAAAGGCACCAAAACCAATTGGATCATGCATGAGTATCGCCTTCTCGATAATTCCAGAAAGAACGGTAGCTCCAAGCTCGATGATTGGGTTTTGTGTCGGATTTACAAGAAGCATTCGAGCTCGCAGAAGAGTGGTATTGTACCCAGTGTTTCGAGCAGAGAATACAGCTACAGCAACGGGTCTTCCTCTTCGTCCTCGTCGCAACTCGACGACGTGCTCGAATCGTTGCCGGAGATCGGCGACCGACGATTCGCTCTCCCTCGGGTCAACTCGCTCAAGACGCTacaaaatcatcatcatcaacaacaaCCGCAGCAGCAGCCACAAGAAGAAGACGATAAGTTCAATTTCCAGAATTTTGCGGATTGGGCTAACCCGACGGGTATTAACTCCGTACCCGACTTCGTCTCCGGGAATCAGACTCAGGGGATGGCGAATTACAATCCGGGAAATGACCTTTATGTCCCTTCCATGTCGACACTCTGCCACGTGGACTCTACAATGGCGGTGCCGCCGGTGGCGGAGAAGCTCGGGAATGCAATGGAGGAGGAGGTTCAGAGTGGAGTGAGAGGGCAGCAACGGGTGGATAATTCGGGCGGGTTATTCCAACAGAATTCAAATGTGTTTGGGCTTGACCCGTATGGGTTCAGATACCCGAGTCAGCTGGTCGGGTTCGGGCTCCAGCAATga 1065 0.5023 MGVPEIDPLSQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLDNSRKNGSSKLDDWVLCRIYKKHSSSQKSGIVPSVSSREYSYSNGSSSSSSSQLDDVLESLPEIGDRRFALPRVNSLKTLQNHHHQQQPQQQPQEEDDKFNFQNFADWANPTGINSVPDFVSGNQTQGMANYNPGNDLYVPSMSTLCHVDSTMAVPPVAEKLGNAMEEEVQSGVRGQQRVDNSGGLFQQNSNVFGLDPYGFRYPSQLVGFGLQQ 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2885 354 PANTHER NAC DOMAIN-CONTAINING PROTEIN 55 1 328 - -
Sto4g2885 354 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Sto4g2885 354 MobiDBLite consensus disorder prediction 168 194 - -
Sto4g2885 354 Gene3D NAC domain 23 167 IPR036093 GO:0003677|GO:0006355
Sto4g2885 354 PANTHER NAC TRANSCRIPTION FACTOR 56 1 328 - -
Sto4g2885 354 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Sto4g2885 354 SUPERFAMILY NAC domain 10 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2885 Sto-Chr4 29457167 29458451 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2885 1 273 NAC Transcription Factor Family AT4G27410 65.172 4.99e-127 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto4g2885 NAM 7.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2885 - - cit:102612201 466.463