Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2883 ATGGAAAGCACGGAATCGTCGACCGGTTCGCAACAGCCGAACCTGCCGCCGGGTTTCCGGTTCCACCCGACCGACGAGGAGCTCGTTGTTCACTACCTCAAGAAGAAGGCCTCGTCTTCTCCTCTTCCCGTCGCCATCATCGCCGAGGTCGATCTCTACAAGTTCGACCCTTGGGAACTCCCAGCTAAGGCAGCGTTTGGGGAGCAAGAGTGGTACTTCTTTAGCCCAAGGGATAGGAAGTACCCAAACGGAGCAAGGCCAAACAGGGCAGCGACATCTGGGTATTGGAAGGCAACGGGGACTGATAAGCCTGTGTTGACATGTGGTGGGACCCAGAAAGTTGGTGTGAAGAAAGCTTTGGTTTTCTATGGAGGAAAGCCACCCAGAGGAATCAAAACCAATTGGATCATGCATGAATATAGGCTCGCTGATAATAAGCCCAACAATAAACCTCCTGGCTGTGACTTGCCCAACAAGAAAAATTCCCTCCGCTTGGATGATTGGGTTTTGTGCCGAATCTACAAGAAGAATAACACACAGAGATCAGGGATGGATCACGAGGAGTCATCAATGGAAGATATGATGGGAGGAATTAGCGTTGCTCCATCGATCAACGTAGGGCAGATGAACGCAAGGTTTCATCTTTCTAAAATGTCCACCACTTATGGCGGCGGTTCCAGTTCGCTGTTGCTAGACAATAGCAACGACGTCGTGGTACACAACAACTTGTTGGAAGGTAGTATGAACAATAATAGCAACGGTATTGGGATGGGCGTTGCGTCAGTTTCGGAGCTTCCTTTTGTCACAACTATGTCTATGGGTGGAACCACAATTGCGAATTCTTCCCCGGCTCCGTCGAAACGGACGCTATCTTCGCTGTATTGGAACGTGGAGGATGATTTGGGTGGTGCTGGAACTTCATCCAACAATAAGAGACTCAGTttggaaaataataataataataataatgatgatgatgataataactGTGGTGGCGGTGGTTCTACTGCTGCTACAACTACTTCTATTGCATCTCTGCTTAATCAGTTCCCTCAAACCCCTAATTCAATGGTAGGATCTTTGGGAGATGGGCTCTTTCGTGCACAGTATCAAATACCAGGAATGCCTTGGTATGCTTAG 1140 0.4737 MESTESSTGSQQPNLPPGFRFHPTDEELVVHYLKKKASSSPLPVAIIAEVDLYKFDPWELPAKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTCGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNKPPGCDLPNKKNSLRLDDWVLCRIYKKNNTQRSGMDHEESSMEDMMGGISVAPSINVGQMNARFHLSKMSTTYGGGSSSLLLDNSNDVVVHNNLLEGSMNNNSNGIGMGVASVSELPFVTTMSMGGTTIANSSPAPSKRTLSSLYWNVEDDLGGAGTSSNNKRLSLENNNNNNNDDDDNNCGGGGSTAATTTSIASLLNQFPQTPNSMVGSLGDGLFRAQYQIPGMPWYA 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2883 379 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Sto4g2883 379 PANTHER NAC TRANSCRIPTION FACTOR 56 1 355 - -
Sto4g2883 379 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Sto4g2883 379 MobiDBLite consensus disorder prediction 1 20 - -
Sto4g2883 379 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Sto4g2883 379 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 355 - -
Sto4g2883 379 MobiDBLite consensus disorder prediction 1 17 - -
Sto4g2883 379 MobiDBLite consensus disorder prediction 304 336 - -
Sto4g2883 379 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2883 Sto-Chr4 29439871 29441219 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2883 1 379 NAC Transcription Factor Family AT3G15510 50.505 1.89e-119 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto4g2883 NAM 1.6e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2883 - - vra:106763825 493.041