Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2870 ATGTGTTTAGGTGAAGTAGTAATGTCAAAGGGTAGTGTGGAAATAAGTAGTGAGATATTAAGAGAGCAAGAAGGAGATAGAGTGAAGGGATTACCAGGCCAACCTTCTTCTGTGAATTTCGACCAATTTTCTGGTTATATCACTGTCAATCAATCCCATGGAAGAGCACTGTTCTATTGGTTCTTCCACTCCACACATTCCCCACATCGGAAACCTCTCCTTCTCTGGCTCAATGGAGGTCCTGGATGTTCCTCAATTGGTTTCGGAGAAGCAGAGGAGCTAGGTCCCTTCTTCCCCCAGAACACCACCCAACCAAACCTCAAGTTAAACCCTTATTCTTGGAACAAAGCTGCAAACCTTTTGTTTCTGGAATCCCCTGTAGGAGTTGGATTTTCCTACACCAACACCACCTCTGACATCAATCAACTTGGTGACAGAATCactgCTGAGGATTCATACACCTTCATCATCAAATGGTTTCGCCGTTTTCCCCAATTCAGATCCCATGAGTTCTATATTGCAGGTGAAAGCTATGCAGGACACTACGTTCCTCAACTCTCTGAGCTCATTTTTGAGCGAAATCATAACTCCACCAGCGAAGACTACATTAACTTCAAAGGCTTCATGATTGGGAATGCATTACTAGACGATGAAACAGACCAAAAGGGGATGATAGAATATGCTTGGGATCATGCAGTGATATCTGATGTTTTATACCAAAACATCAAAAGCAAATGCAATTTCAGCCTTGCAGAGCAAACAAATGAGTGCAACGTTTTACTGAACAAGTACTTCGATGTGTATAAGATTATAGACATGTATAGCTTGTATACTCCCATGTGTACCTCCAACAACTCTAACTCCAAAACATCAGAAGCCCCTCTCATCACAGGCGTGGCCCCCCATTCATTTTCTAAATTTGATGCACCTTCGTCAATGCTCCCTGTGATGAGGAAGCTTATAGCTGGAGGTCTTCGCGTATGGGTttacagtggagaTACGGATGGGAGAATTCCAGTAACTGCGACGAGATACACTCTACAAAAATTGGGTCTTAGAGTTATTGAAGATTGGACTCCCTGGTATACCAGCAAGCAGGTAGGTGGATGGAGCGTTATATACGATGGGCTGACTTATGTGACCATTAGAGGTGCTGGCCATCAAGTTCCTACTTTTGCTCCTAAGCAATCTCTTCAGCTGCTTCGACACTTCTTGGCCAATAAGAAATTGCCACCTCAACCTTTTCAATaa 1251 0.4277 MCLGEVVMSKGSVEISSEILREQEGDRVKGLPGQPSSVNFDQFSGYITVNQSHGRALFYWFFHSTHSPHRKPLLLWLNGGPGCSSIGFGEAEELGPFFPQNTTQPNLKLNPYSWNKAANLLFLESPVGVGFSYTNTTSDINQLGDRITAEDSYTFIIKWFRRFPQFRSHEFYIAGESYAGHYVPQLSELIFERNHNSTSEDYINFKGFMIGNALLDDETDQKGMIEYAWDHAVISDVLYQNIKSKCNFSLAEQTNECNVLLNKYFDVYKIIDMYSLYTPMCTSNNSNSKTSEAPLITGVAPHSFSKFDAPSSMLPVMRKLIAGGLRVWVYSGDTDGRIPVTATRYTLQKLGLRVIEDWTPWYTSKQVGGWSVIYDGLTYVTIRGAGHQVPTFAPKQSLQLLRHFLANKKLPPQPFQ 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2870 416 ProSitePatterns Serine carboxypeptidases, histidine active site. 377 394 IPR033124 GO:0004185
Sto4g2870 416 Pfam Serine carboxypeptidase 32 302 IPR001563 GO:0004185|GO:0006508
Sto4g2870 416 Pfam Serine carboxypeptidase 307 407 IPR001563 GO:0004185|GO:0006508
Sto4g2870 416 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 16 289 IPR001563 GO:0004185|GO:0006508
Sto4g2870 416 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 307 414 IPR001563 GO:0004185|GO:0006508
Sto4g2870 416 SUPERFAMILY alpha/beta-Hydrolases 28 410 IPR029058 -
Sto4g2870 416 ProSitePatterns Serine carboxypeptidases, serine active site. 173 180 IPR018202 GO:0004185
Sto4g2870 416 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Sto4g2870 416 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
Sto4g2870 416 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Sto4g2870 416 PRINTS Carboxypeptidase C serine protease (S10) family signature 377 390 IPR001563 GO:0004185|GO:0006508
Sto4g2870 416 Gene3D alpha/beta hydrolase 296 412 IPR029058 -
Sto4g2870 416 PANTHER CARBOXYPEPTIDASE 307 414 - -
Sto4g2870 416 PANTHER CARBOXYPEPTIDASE 16 289 - -
Sto4g2870 416 Gene3D alpha/beta hydrolase 22 283 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2870 Sto-Chr4 29360973 29366136 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2870 324 410 Calmodulin-binding Proteins AT2G22960 32.955 1.26e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2870 K16297 - gmx:100797264 630.557