Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2860 ATGGGTTGTGTCTGTTGCAAGCCCTTTGCAATTGAGGACAGCAGGGAGAGCCCGAGGGACCGATTAACAAGTAAGGCTTCGTTGGACTCTCGTGTATCTAGGGCTACCTCATCGAGGAGGGAGGAAGGATACCGGTCGAAGGATAGATATGATAGTAATGATGGTAAACAAGGAAATGGCTTGGTTCGTTCACAAGGTGATAATTCTGAAAGGAAGAGGGAGAAAACAGAATCCATTGTTCCTCAGCATCCGGGGATTGGTAGTGTTCCAAAAGCCGTAGAAGGGGAGCAGGTTGCTGCTGGATGGCCTTCATGGTTGGCAGCAGTGGCTGGAGAGGCTATCAAGGGATGGTTGCCACGGCGTGCAGATTCTTTTGAGAAGCTGGATAAAATTGGTCAGGGAACTTATAGTAATGTTTATAGGGCTCGTGATCTtgaacaaaagaaaattgttgCGTTAAAAAAGGTGAGATTTGATAATCTTGAACCTGAGAGTGTTCGCTTTATGGCGAGGGAAATTCACATTCTACGTCGGCTTGATCATCCAAATGTTATAAAATTGGAAGGCCTGGTTACATCAAGGATGTCCTGCAGCTTATACCTTGTTTTTGAGTACATGGAACATGATTTGGCTGGGCTTGCTTCACATCCTGGACTAAAGTTTACAGAAGCACAGGTCAAATGTTACATGCAGCAACTTTTATGTGGGCTAGATCACTGCCACAGCTGTGGTGTCCTGCACCGTGACATTAAGGGTTCCAACCTTCTGATTGACAACAATGGAGTCTTGAAGATTGCAGACTTTGGTTTGGCAAGCTTTTTTGACCCCAATCAAATTCAGCCATTGACAAGTCGAGTAGTCACTCTTTGGTATCGACCGCCAGAGCTTTTGCTTGGAGCCACTTACTATGGCACCGCAGTAGATTTATGGAGTACGGGTTGCATACTTGCTGAACTGTATGCTGGCAAGCCTATTATGCCTGGAAGAACTGAGGTTGAGCAGTTAcataaaatattcaaactttGTGGTTCACCTTCTGAGGATTATTGGAGAAAATCGAAGTTACCTCATGCAACAATATTTAAGCCTCAACAGCCCTATAAGCGGTGTGTTGCAGAAACATTTAAGGACTTTCCTGCACCTGCATTAGCACTCATGGAGACCCTTTTGTCCATAGATCCTGCTGACCGTGGAACAGCAGCATCCGCTTTGAAGAATGAGTTCTTCACAACGAAACCCTTACCTTGTGATCCTTCAAGCTTGCCTAAGTATCCTCCTAGCAAAGAATTTGATGCCAAAGTTCGGGATGAAGAAGCTAGAAGACAAGGAGCAGCAGGAAGCAAAGGGCAGAGGCATGAACCTGAGAGAAAAGGATCAAGAGAATCTCGAGCAGTCCCTGCTCCCGATGCTAATGCTGAACTGGTCTTGTCAATGCAGAAGAGACAAGGTCAGCCCAACTCAAAGAGCCGTAGTGAGAAGTTTAATCCTCATCCTGAAGAAGTTGCTTCAGGATTTCCCATTGATCCCCCTAGGCCTTCACAAGCTGTAGAAGTAGGTATAGATCCCCAGGTGCAGCAACATAAAAGAGCCTCCCATTCAGGTCCACTTTGTAACCGAGCTACATGGTCAAAAGCCGGGAAAAACCAGGATGATGCTCCAAAGATTTCAACTGGGGGCGACATATCGGCGTTGTCCGGTTTAGTTGCAGCAAGGAGGAGTATGCTGTCTGATGATCGCCGAGAAAGGTCTGGATCATCGCAAGCAGAGGTTCCAAAACTAATTTGTCGGTTCCCAGGATCCTTGAAGGAGGCCTCAGAATCATCGATGCAACAGGACCTAAAGCCTCAAGTACAAGGCGTTGTAGCTCCTCCTCCGAAAGAAGAAGGGAGAGGCAGCAACAAAGACCCAATTCTTGTTGGTTATGGGTCAAAGGGTCAAAAAATTCATTATTCTGGTCCATTGCTTGTGCCATCTAACAACATGGATCAGATGTTGAAGGATCACGATCGGCAAATTCAAGAAGCCGTTAGAAGGGCACGTCTCGACAAGGCAAAGATGAGAAGACTTCAAGCTGAAGGGAGCCAGATAACCACCACAAATTCATTATTTGTTTCTGGTCGCTGA 2124 0.4562 MGCVCCKPFAIEDSRESPRDRLTSKASLDSRVSRATSSRREEGYRSKDRYDSNDGKQGNGLVRSQGDNSERKREKTESIVPQHPGIGSVPKAVEGEQVAAGWPSWLAAVAGEAIKGWLPRRADSFEKLDKIGQGTYSNVYRARDLEQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFTEAQVKCYMQQLLCGLDHCHSCGVLHRDIKGSNLLIDNNGVLKIADFGLASFFDPNQIQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGTAASALKNEFFTTKPLPCDPSSLPKYPPSKEFDAKVRDEEARRQGAAGSKGQRHEPERKGSRESRAVPAPDANAELVLSMQKRQGQPNSKSRSEKFNPHPEEVASGFPIDPPRPSQAVEVGIDPQVQQHKRASHSGPLCNRATWSKAGKNQDDAPKISTGGDISALSGLVAARRSMLSDDRRERSGSSQAEVPKLICRFPGSLKEASESSMQQDLKPQVQGVVAPPPKEEGRGSNKDPILVGYGSKGQKIHYSGPLLVPSNNMDQMLKDHDRQIQEAVRRARLDKAKMRRLQAEGSQITTTNSLFVSGR 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2860 707 PANTHER CELL DIVISION PROTEIN KINASE 35 688 - -
Sto4g2860 707 MobiDBLite consensus disorder prediction 428 463 - -
Sto4g2860 707 MobiDBLite consensus disorder prediction 34 54 - -
Sto4g2860 707 MobiDBLite consensus disorder prediction 477 491 - -
Sto4g2860 707 Pfam Protein kinase domain 125 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2860 707 Gene3D Phosphorylase Kinase; domain 1 112 207 - -
Sto4g2860 707 MobiDBLite consensus disorder prediction 14 88 - -
Sto4g2860 707 SMART serkin_6 125 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2860 707 MobiDBLite consensus disorder prediction 526 545 - -
Sto4g2860 707 ProSiteProfiles Protein kinase domain profile. 125 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2860 707 Coils Coil 672 692 - -
Sto4g2860 707 ProSitePatterns Protein kinases ATP-binding region signature. 131 154 IPR017441 GO:0005524
Sto4g2860 707 MobiDBLite consensus disorder prediction 601 636 - -
Sto4g2860 707 PANTHER CYCLIN-DEPENDENT KINASE 35 688 - -
Sto4g2860 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Sto4g2860 707 CDD STKc_CDK9_like 125 409 - -
Sto4g2860 707 Gene3D Transferase(Phosphotransferase) domain 1 208 448 - -
Sto4g2860 707 MobiDBLite consensus disorder prediction 415 560 - -
Sto4g2860 707 SUPERFAMILY Protein kinase-like (PK-like) 119 417 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2860 Sto-Chr4 29294899 29299779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2860 117 460 Core Cell Cycle Gene Families AT5G10270 52.778 1.06e-120 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Sto4g2860 Pkinase 1.3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2860 - - gmx:100792173 1228.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2860 4 29294899 29299779 Sto4g2860 4 29294899 29299779 ECH