Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2842 ATGGCGCTGCTAAGATATTTCTTGATGACTCTTCTCCAATGGGGGTTCTTGACCTTCTTTCTTTGCTTATCTTTGGGTCTAACAACTCCAAGCCCTTCTTGTGACTCCCATGATCTGTCTGCCCTGAAGGAATTTGCAGGAAACCTCACAAATGGGTCTATCATCACATCATGGTCCGATGATATTAGTTGCTGCAAATGGGTTGGAGTAGTCTGTGATAATGTGACTGATGGGAAAGCTGCTAGTAGAGTGATCAAGTTGATTCTTCCTCAAATGGGTCTCAAAGGGGTAATCTCCAAATCTCTAGCGCAGTTGGATCAATTGATTGTGCTGGATCTTTCATTCAATCATCTCCAAGGTGGGTTACCTTCTGAATTCTCCAAGTTGAAGCTGCTGAAATATCTTGACTTGAGCCATAACATGCTGGCGGGACCTGTTTCTGGAGTACTTTCTGGTTTGCAATCCATTCAGATACTGAATATTTCTAGCAATTCATTTGTTGAAAATCTCTCCCAGCTTGGGGAATTCCCACATCTCCTTGCATTCAACATAAGCAACAATTCATTCAATGGTACGTTCATTTCTCAAGTATGCAGTTCCTCTCTGGGACTTCATATGCTTGATTTGTCCACAAATCGTTTTACTGGTGGTCTTGAAGGCTTGAGCAACTGTAGCACATCTCTCCAAGAGTTGCATTTGGATTACAATTCGTTTTCAGGTTCTCTTCCTGATTCCTTGTACTCCTTTTCTGCCTTGGAGCATCTCTCAGTGTCTATGAACTATTTCTCTGGCAATTTAAGCAAGCAGCTAAGTAAGCTCTCTAACCTAAAGTCTTTGATCATTTCTGGGAACCTGTTTTCTGGGAATCTCCCAGATGTGTTCTTGAATCTGTCACGTTTAGAACAATTAGCAGCACACTCCAATTCATTTTCTGGGCCATTGCCTCCTACTCTAGCTTCATGCACAAACCTTAGGGTGCTTGATCTTCGAAATAATTCTCTGAGTGGTCCATTTGATCTTAATTTCACTGGGTTGACTAATCTGTGTACACTTGATCTTGCTACCAATCATTTTACTGGTTCACTTCCAAGATCCTTGTCCTATTGCCGTGAATTGAAAGTTTTGAGTCTTGCTAAGAATGGTTTTACTGGCTCAATCCCTGAAAACTATGCCAACCTCACCTCCCTTACGTTTCTGTCTTTATCCAACAACAGCATGGAGAATTTATCTGGGGCGCTTTCGGTGCTGCAGCATTGCACAAACCTCACAACTCTTATCCTCTCAAAGAACTTCCATGGTGAGGAAATTCCAGAAGTTGCTAAAGGCTTTGAGAACCTTATGACTTTAGCACTCGGAAATTGTGGTCTAAAAGGCCAAGTCCCTGCTTGGCTATTGAATTGCAGCAAGTTGGCAGTCCTTGATTTGTCTTGGAACCATTTGAATGGTAGTATCCCCTCCTGGATTGGTAGGATGGAGAATTTGTTCTACTTGGATTTCTCAAACAATTCTTTCACTGGAGAAATACCGAAAAGTTTGACGGAGTTGAGAAGCCTTGTATCTACAAATTGCAGTAGATCAAATCTCTCTGCGTCCGCCGGCATTCCTCTTTATGTTAAGAGAAACAAGAGTGCTAGTGGGCTGCAATATAACCAGGTCTCAAGTTTCCCTCCTTCAATATATCTGAGCTATAACCATTTAAGAGGAATAATATGGCCTGAAATTGGGCAACTGAAAGCACTTCATGTCTTGGATTTAAGCAGGAATGACATCTCTGGTACAATTCCTAGCTCTATTTCAGAGATGGAGAACTTGGAAATTTTGGATCTGTCATATAACAATCTCTCTGGAATGATTCCTCCATCATTTAATAACCTAACATTCCTGTCAAAGTTCAGCGTGGCATATAATCACTTACAGGGACCAATTCCAACAGGTGGACAGTTTCTAAGCTTCTCTAGTTCAAGCTTTGAGGGTAACCTGGGACTTTGTAGGGAAATAGATTCTCCTTGCAAAATCACCAACAATATGGGGTTGAAGCCCAATATTTCTTCTGGTTCTTCCAGCAAGTTCAGTAGAAACTATGTTCTTGGCATAACAATTGGTATAGGCGTTGGGCTTGCACTGCTTCTTTCTATTGTTCTGCTAAAAATATCAAAGAGAGATGAAGAGAAGCCGGTTGAGAACTTTGACGAGGAACTGGGGAGGCCCCATAGGTTATCTGAAGCACTTGTTTCTTCGAAATTGGTGCTTTTTCAGAACTCAGATTGCAAGGATCTCACAGTTGCAGATTTGTTGAAATCCACAAACAATTTCAACCAAGCAAACATTATTGGTTGTGGTGGGTTTGGTCTTGTGTACAAGGCGTATCTTCCAAACGGCACAAAAGCTGCTGTCAAGAGACTTTCTGGGGACTGTGGTCAGATGGAACGTGAATTTCAAGCTGAAGTAGAAGCCCTCTCAAGAGCTCAGCACAAGAACCTTGTTTCTCTTAAAGGTTATTGTCGGCATGGCAACGACAGATTGTTAATTTACTCCTACTTGGAGAATGGAAGCTTGGATTATTGGCTGCATGAGTGTATGAAATTCGAAAACAAGGAGCAAGAAATTTTCGATCCAGCCATTTGGGACAAGGACCACGAGAAGCAGCTCTTGGAGGTTTTTGATGTTGCTTGTAGATGTTTAAACCAGGATCCAAGGGAGCGACCCAGTATCGAAGAAGTTGTTTCGTCGCTCGATCGTGTAGGGTTTGATGGTTTTCAGCAATGA 2766 0.4201 MALLRYFLMTLLQWGFLTFFLCLSLGLTTPSPSCDSHDLSALKEFAGNLTNGSIITSWSDDISCCKWVGVVCDNVTDGKAASRVIKLILPQMGLKGVISKSLAQLDQLIVLDLSFNHLQGGLPSEFSKLKLLKYLDLSHNMLAGPVSGVLSGLQSIQILNISSNSFVENLSQLGEFPHLLAFNISNNSFNGTFISQVCSSSLGLHMLDLSTNRFTGGLEGLSNCSTSLQELHLDYNSFSGSLPDSLYSFSALEHLSVSMNYFSGNLSKQLSKLSNLKSLIISGNLFSGNLPDVFLNLSRLEQLAAHSNSFSGPLPPTLASCTNLRVLDLRNNSLSGPFDLNFTGLTNLCTLDLATNHFTGSLPRSLSYCRELKVLSLAKNGFTGSIPENYANLTSLTFLSLSNNSMENLSGALSVLQHCTNLTTLILSKNFHGEEIPEVAKGFENLMTLALGNCGLKGQVPAWLLNCSKLAVLDLSWNHLNGSIPSWIGRMENLFYLDFSNNSFTGEIPKSLTELRSLVSTNCSRSNLSASAGIPLYVKRNKSASGLQYNQVSSFPPSIYLSYNHLRGIIWPEIGQLKALHVLDLSRNDISGTIPSSISEMENLEILDLSYNNLSGMIPPSFNNLTFLSKFSVAYNHLQGPIPTGGQFLSFSSSSFEGNLGLCREIDSPCKITNNMGLKPNISSGSSSKFSRNYVLGITIGIGVGLALLLSIVLLKISKRDEEKPVENFDEELGRPHRLSEALVSSKLVLFQNSDCKDLTVADLLKSTNNFNQANIIGCGGFGLVYKAYLPNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLKGYCRHGNDRLLIYSYLENGSLDYWLHECMKFENKEQEIFDPAIWDKDHEKQLLEVFDVACRCLNQDPRERPSIEEVVSSLDRVGFDGFQQ 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2842 921 Pfam Leucine rich repeat 108 165 IPR001611 GO:0005515
Sto4g2842 921 Pfam Leucine rich repeat 579 638 IPR001611 GO:0005515
Sto4g2842 921 Pfam Leucine rich repeat 322 381 IPR001611 GO:0005515
Sto4g2842 921 PANTHER PHYTOSULFOKINE RECEPTOR 2 614 861 - -
Sto4g2842 921 PANTHER PHYTOSULFOKINE RECEPTOR 2 560 617 - -
Sto4g2842 921 PANTHER PHYTOSULFOKINE RECEPTOR 2 173 282 - -
Sto4g2842 921 PANTHER PHYTOSULFOKINE RECEPTOR 2 434 518 - -
Sto4g2842 921 PANTHER PHYTOSULFOKINE RECEPTOR 2 282 439 - -
Sto4g2842 921 PANTHER PHYTOSULFOKINE RECEPTOR 2 867 912 - -
Sto4g2842 921 PANTHER PHYTOSULFOKINE RECEPTOR 2 32 164 - -
Sto4g2842 921 Gene3D Ribonuclease Inhibitor 370 674 IPR032675 -
Sto4g2842 921 Pfam Protein tyrosine and serine/threonine kinase 774 859 IPR001245 GO:0004672|GO:0006468
Sto4g2842 921 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Sto4g2842 921 ProSitePatterns Protein kinases ATP-binding region signature. 777 799 IPR017441 GO:0005524
Sto4g2842 921 ProSiteProfiles Leucine-rich repeat profile. 603 624 IPR001611 GO:0005515
Sto4g2842 921 SUPERFAMILY RNI-like 222 529 - -
Sto4g2842 921 PRINTS Leucine-rich repeat signature 132 145 - -
Sto4g2842 921 PRINTS Leucine-rich repeat signature 601 614 - -
Sto4g2842 921 ProSiteProfiles Protein kinase domain profile. 771 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2842 921 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 282 439 - -
Sto4g2842 921 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 173 282 - -
Sto4g2842 921 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 434 518 - -
Sto4g2842 921 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 867 912 - -
Sto4g2842 921 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 164 - -
Sto4g2842 921 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 614 861 - -
Sto4g2842 921 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 560 617 - -
Sto4g2842 921 SUPERFAMILY Protein kinase-like (PK-like) 745 861 IPR011009 -
Sto4g2842 921 Gene3D Phosphorylase Kinase; domain 1 737 842 - -
Sto4g2842 921 SMART LRR_typ_2 577 600 IPR003591 -
Sto4g2842 921 SMART LRR_typ_2 393 416 IPR003591 -
Sto4g2842 921 SMART LRR_typ_2 345 369 IPR003591 -
Sto4g2842 921 SMART LRR_typ_2 467 491 IPR003591 -
Sto4g2842 921 SMART LRR_typ_2 105 128 IPR003591 -
Sto4g2842 921 SMART LRR_typ_2 129 152 IPR003591 -
Sto4g2842 921 SMART LRR_typ_2 273 296 IPR003591 -
Sto4g2842 921 SMART LRR_typ_2 601 624 IPR003591 -
Sto4g2842 921 SMART LRR_typ_2 226 249 IPR003591 -
Sto4g2842 921 SUPERFAMILY L domain-like 37 303 - -
Sto4g2842 921 SUPERFAMILY L domain-like 547 675 - -
Sto4g2842 921 Gene3D Ribonuclease Inhibitor 33 264 IPR032675 -
Sto4g2842 921 Gene3D Transferase(Phosphotransferase) domain 1 843 917 - -
Sto4g2842 921 SMART LRR_sd22_2 601 627 - -
Sto4g2842 921 SMART LRR_sd22_2 393 411 - -
Sto4g2842 921 SMART LRR_sd22_2 321 347 - -
Sto4g2842 921 SMART LRR_sd22_2 129 155 - -
Sto4g2842 921 SMART LRR_sd22_2 577 600 - -
Sto4g2842 921 Gene3D Ribonuclease Inhibitor 265 364 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2842 Sto-Chr4 29170883 29174041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2842 19 701 Miscellaneous Gene Families AT1G17240 40.085 2.71e-149 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Sto4g2842 PK_Tyr_Ser-Thr 4e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2842 - - gmx:100797812 1233.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2842 4 29170883 29174041 Sto4g2842 4 29170883 29174041 ECH