Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2840 TTGCAGGAGAAAGTTGGATTGAGTTCAGATCCTGATTCAGGGAAAGGAAAGAGCAAGATGTCAAAGCACATAACTCATGGCTTTCACTTGGTGAAGGGAAAATCAGCTCATGCTATGGAAGACTATCTTGTTGCAAAATTTAAGCAAGTTGATGGACATGAATTGGGTTTGTTTGCAATATTTGATGGTCACATGGGTCACGACGTACCTGATTACTTACAAGCTAATTTGTTTGAAAATATCTTAAAAGAGCCCGACTTCTGGACAGAAACTAGAGAAGCTGTCAGTAGAGCATATCGTATAACTGATTCCACCATTTTAGAGAAAGCAGTTGAATTAGGGAAAGGAGGTTCAACTGCTGTTACGGCGATATTAATTGATTGTCACAAGCTGGTAATAGCCAATGTTGGGGATTCTAGGGCTGTCATATGCAAGAATGGTGTGGCTAAACAATTATCAGTGGATCATGAGCCAACCACAGAAAAGGAGGAAATTGAAAACAGGGGTGGTTTTGTGTCAAACTTTCCAGGAGATGTTCCACGTGTCGACGGGCAGTTGGCGGTGTCAAGAGCATTTGGTGACAAAAGCTTGAAGAAGCATTTGAGTTCAGAACCATTTGTGACCGAGGAGATCATAGAGGATGACTCGGAGTTTGTTATATTAGCCAGTGATGGATTATGGAAGGTAATGACAAATCAAGAAGCAGTTGATTGTATCAAGGATATAAAGGAGGCTCGGTCTGCAGCAAAGCATCTTACTGAAGAGGCACTCAATCGGAGGAGCTCGGATGATATCTCCTGCATTGTTGTGAAATTTCATTGA 822 0.4161 LQEKVGLSSDPDSGKGKSKMSKHITHGFHLVKGKSAHAMEDYLVAKFKQVDGHELGLFAIFDGHMGHDVPDYLQANLFENILKEPDFWTETREAVSRAYRITDSTILEKAVELGKGGSTAVTAILIDCHKLVIANVGDSRAVICKNGVAKQLSVDHEPTTEKEEIENRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKKHLSSEPFVTEEIIEDDSEFVILASDGLWKVMTNQEAVDCIKDIKEARSAAKHLTEEALNRRSSDDISCIVVKFH 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2840 273 CDD PP2Cc 26 272 IPR001932 -
Sto4g2840 273 SUPERFAMILY PP2C-like 21 273 IPR036457 -
Sto4g2840 273 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 272 - -
Sto4g2840 273 Gene3D - 6 273 IPR036457 -
Sto4g2840 273 SMART PP2C_4 20 270 IPR001932 -
Sto4g2840 273 MobiDBLite consensus disorder prediction 1 21 - -
Sto4g2840 273 PANTHER PROTEIN PHOSPHATASE 2C 1 272 IPR015655 GO:0004722|GO:0006470
Sto4g2840 273 ProSiteProfiles PPM-type phosphatase domain profile. 25 272 IPR001932 -
Sto4g2840 273 Pfam Protein phosphatase 2C 38 265 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2840 Sto-Chr4 29156500 29157876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2840 1 273 PP2C-type Phosphatase Gene Family AT3G15260 76.449 2.29e-157 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2840 K17506 - fve:101303669 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2840 4 29156500 29157876 Sto4g2840 4 29156500 29157876 ECH