Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2838 atggtgGGCTCAGGAGGATCAGGATCAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCACTTCATGAGGCTCTAAGAACCGTTTGTCTTAACTCTGACTGGACTTACTCTGTTTTCTGGACCATTCGTCCTCGTCCAAGAGTTAGGGGAGGTAATGGCTGCAAGGTTGGGGACGATAACGGCAGCTTGATGTTGATGTGGGAAGATGGATTCTGCCGTGGAAGGGTTTCAGATTGTCTGGAAGACATTGATGGAGAAGATCCTGTCAGAAAAGCCTTCAGCAAAATGTCCATTCAGTTATATAATTATGGAGAAGGGTTGATGGGAAAAGTTGCATCTGATAAGTGTCACAAATGGGTATTTAAAGAGCCCACAGAATGTGAACCAAACATCTCCAACTACTGGCAAAGCTCCTTTGATGCTCTTCCACCTGAATGGACCGATCAATTTGAATCAGGCATTCAGACTATAGCTGTCATTCAAGCTGGCCATGGACTTCTTCAGCTTGGTTCTTGCAAGATTATTCCAGAAGACCTACATTTTGTGCTAAGAATGAGGCACACGTTCGAATCTCTTGGCTACCAATCTGGCTTTTACCTATCTCAACTCTTCTCTTCAACGAGGAACACATGCTCCTCCTCCTCTAACTCCTCGAAACCATCCTCGGCCGCCGCCATTACTAGTCCCGGCCTCCGTCCGGCGCCTCCTCTCTTCGCGTGGCCTCATCCTTCCAACATCCTCTCCTCTCCCACCTCCTTCCACCATCCTCTTCCATTCCCACCACAACCCAACAACAAAGACCAACCACACCTCTTcctccatcatcatcacatGGACCAAACCCCCCCACTCCAAGACAACATCATGCCTACTCCAAGTACTGCTGATCACCATGAAAACGACATCAAATGGCCCAATGGGCTCTCCTTCTTCAACGCTCTAACGGGCCGGGCCGATGAGACGGCCCACAAGCTCTTATTTAACCCGGATGGCAGGCAGACGGAAGAGGATCAAGATCAGGATCAGGTGGAGAGTGGTGTGAGGAAGATGGACAAGTTTAAGAGGAGCTTCACTTTGCCTGCTAGAGTAGCGACTTCTACGTCGTCTCCCTCGTCTCCTTCCTCCATTCATCATCAAGCAGCTATGGAGTATAGGAACTCAGAAGGAGGGATGTACCAGGATGTGATGGAGACGTTTCTCGACTGA 1206 0.4818 MVGSGGSGSDRSKEAVGMMALHEALRTVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRVSDCLEDIDGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTCSSSSNSSKPSSAAAITSPGLRPAPPLFAWPHPSNILSSPTSFHHPLPFPPQPNNKDQPHLFLHHHHMDQTPPLQDNIMPTPSTADHHENDIKWPNGLSFFNALTGRADETAHKLLFNPDGRQTEEDQDQDQVESGVRKMDKFKRSFTLPARVATSTSSPSSPSSIHHQAAMEYRNSEGGMYQDVMETFLD 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2838 401 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 21 189 IPR025610 -
Sto4g2838 401 PANTHER GB|AAF34833.1 1 401 IPR044170 -
Sto4g2838 401 MobiDBLite consensus disorder prediction 328 347 - -
Sto4g2838 401 MobiDBLite consensus disorder prediction 251 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2838 Sto-Chr4 29147630 29150343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2838 22 192 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 32.558 4.84e-20 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2838 - - aip:107614137 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2838 4 29147630 29150343 Sto4g2838 4 29147630 29150343 ECH