Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2816 ATGGATGAGATGACTGATTTTGATGTGGATCAACAAAGGCATGGAAATTTTAATTCTGAACCCTGTGTCCTTGCGAGGGGTCTCAACATTTCACAATCAAATACCCACACAGTGACAACAGCTTCAGGGAACACTACTAGTCTTGATTCCCACTATTTACCAGAGGCTTATGACAATGCTGTCATGTATGGTGTGACACAATATAATGGCATTCCACATCAGCACAATCTTGATATGGGTGTTGCAGCCACAACCAACTTGCATTATTCCGGCATAAATCCTTCATCTAGTACTGGTGTATTACCTCTCCCTATTAATCACAGAGCACCTGATCAGTTGCCAGCTTCGACCACATTTTCTGTGTCTGGTGTTTCTTATGATAATTTTGGAAGGAGCAGTAGCTTTGTGGATGATGTCAGAGGTCCATTCAAAAGAAAAAGTGCTGAAGCCATTAGAGGAAATTTCCAGTATTTCGATGCCTCAGCTAGTTCTTCAGTTGCTCCCCCAAATGCAAGGTTTTCTGATGGAGTTGCAATGGTGGATACTGCTTCCATGTCCCTGCCTCAATTCCGAGGAAATAGCATCCCTTCACACATGGAACTAGGACCTCCTGGTAGTTTGTGGGGCAGGTCAGGTGAGGCTGTTATGGTGCATGAACATAACCATATGATTCGAGGAAACTATTTAGGGCAGCCCTTTCAGCCAGTTGTTCCTCCCTGGTTCGAACATTGTACTAATCAGTCTATTCCAATGCCTTATATGCGGGGTAAAGATGCTAAAGCTCTCAGTATTTTCTGTTTTGCAGTTCCCCCCATCTTACGCACTATAATTATTACTTTGATGTTCTGTAAGTCCATTGTTTATGATGACATTCATAATGTTCTGTCTGGATTTCGCCTGTCTGATACTCCCTCCCTCCTATACTCTCCAGCGCCCAATGTTAGTGGAAGTCCATTAGAGAATGCAAATATGGGTTTGCAGAGATATCATGATAGCAACCTAAGTGGCCTTAGGTTTCTTCATCATCCTGCGAGTCCACACCACCATAATTATCATCATCCAACACTACCTATGCAAGCAGCTAGAGGCCACAATATCAACTTTCAACCTCCAGTAACTGCAGCTTCTTATAGAGTTCCAACAAATTCTTCACGCAATGCTGTGATTCCTGCACAGAATGGTTTCGAGATGGGTACTAGGCATTTTGGTGTTGTACCACCAGCAGGCCTACGGTATATCCGTCCTCATAGAGGATTCATGCCTGATGCAGCTATTGGACATCGACATATTCCCCCCATGGGTTTTCTCCGAGTTGATGATGCTGTTGTACTTGACGAAGTGGGAATGGTTGACCATCACAGAGATATGCGCTTGGACATAGAGGATATGTCTTATGAGGCAagtaaacaaactcaactagcATATTTTACTATTGAGCTTCTTGCATTGGGTGAGCGAATTGGCAATGTAAGCACTGGTTTATCAGAGGAATCCGTTTCAACTCTGATGAAGACCAGAATTTATGTAACATCTACTGCTATTAATCCGGAGGAGGAAGCGACCGAGGACCAGGAAACCGATTCTTGCATAATATGCCAGGATAAATATAAGAACCGAGAGAAAATTGGAATTCTTGAATGTGGGCATGAGTATCATGCAGATTGCTTGAAGAAGTGGCTGCATGTGAAAAATGTGTGCCCTATATGCAAATCAGAAGCATTGACTCCTGGGAAGAAGAAGGACAAGGAGAATAGAAACCaatga 1764 0.4263 MDEMTDFDVDQQRHGNFNSEPCVLARGLNISQSNTHTVTTASGNTTSLDSHYLPEAYDNAVMYGVTQYNGIPHQHNLDMGVAATTNLHYSGINPSSSTGVLPLPINHRAPDQLPASTTFSVSGVSYDNFGRSSSFVDDVRGPFKRKSAEAIRGNFQYFDASASSSVAPPNARFSDGVAMVDTASMSLPQFRGNSIPSHMELGPPGSLWGRSGEAVMVHEHNHMIRGNYLGQPFQPVVPPWFEHCTNQSIPMPYMRGKDAKALSIFCFAVPPILRTIIITLMFCKSIVYDDIHNVLSGFRLSDTPSLLYSPAPNVSGSPLENANMGLQRYHDSNLSGLRFLHHPASPHHHNYHHPTLPMQAARGHNINFQPPVTAASYRVPTNSSRNAVIPAQNGFEMGTRHFGVVPPAGLRYIRPHRGFMPDAAIGHRHIPPMGFLRVDDAVVLDEVGMVDHHRDMRLDIEDMSYEASKQTQLAYFTIELLALGERIGNVSTGLSEESVSTLMKTRIYVTSTAINPEEEATEDQETDSCIICQDKYKNREKIGILECGHEYHADCLKKWLHVKNVCPICKSEALTPGKKKDKENRNQ 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2816 587 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 128 578 - -
Sto4g2816 587 SMART ring_2 529 569 IPR001841 -
Sto4g2816 587 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 128 578 IPR045191 GO:0061630
Sto4g2816 587 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 488 574 IPR013083 -
Sto4g2816 587 ProSiteProfiles Zinc finger RING-type profile. 529 570 IPR001841 -
Sto4g2816 587 SUPERFAMILY RING/U-box 528 575 - -
Sto4g2816 587 Pfam Ring finger domain 527 570 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2816 Sto-Chr4 28973214 28975844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2816 436 574 C3H Transcription Factor Family AT2G15530 46.897 2.14e-34 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2816 K19041 - gmx:100800642 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2816 4 28973214 28975844 Sto4g2816 4 28973214 28975844 ECH