Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2809 ATGCCAACAACTTTTCTTTCCGCCGCCACAACTCAACAATTTCACCAACAACAAAATTCACCGCCCTTCATCCCAACCTGGGCCGACGAGTTTCTCGACTTCTCCTCCGCCCGCCGCGGGGCCCACCGCCGCTCCGCGAGCGACTCGGTTGCCTTTCTCGACACGGCATTCCTCGCCGCCGGTGGAAACCATCATCTTGGGTTTGACCGGCTGGACGACGACCAGCTCATCTCCATGTTCTCCGACGTTGACGTCGGCGGCGCTGTTTCCATGCTGCCGTCGTCGTCCGCCACCGCGTCCATGTCGACGCCGTCCACGCCGTCCGACCAGAACAGCAATGACGATGATGAGACGCCTATGGCGCTGGACGACGTCGTTCTGGCAAATCAGGAGCAGTGGCAGCCCAAAAATGAACCCCTGGAGGTTGAAAGCGCATGCAAGAATGAGATCAGTGACACgccaccgccaccgccaccaCCCTCCGCCGGCGGCGAAACTGTCTTCGACCCAAAAAGGGTCAAaagGATTTTGGCTAATCGGCAGTCAGCTCAGAGGTCGAGGGTGAGAAAGCTGCAATACATTTCTGAGTTAGAAAGAAGCGTATCAACATTGCAGACGGAGGTATCAGCATTATCGCCAAGAGTTGCATTCTTGGACCACCAACGTTTGCTTCTCAATGTGGATAATAGTGCTTTAAAGCAACGGATTGCTGCTTTGGCTCAagacaaaatttttaaagatgCTCACCATGAAGCATTGAGAAAGGAGATAGAAAGACTAAGGCAAATATATGAGCATCAGATGAAGATGGAGAAATCAGTAAATAACACTCATAATTGTCTTCACTCATCATCTCAGGCTTTGGGATGTACGGACAAGGATGAGCTCCTATGTTGA 897 0.5006 MPTTFLSAATTQQFHQQQNSPPFIPTWADEFLDFSSARRGAHRRSASDSVAFLDTAFLAAGGNHHLGFDRLDDDQLISMFSDVDVGGAVSMLPSSSATASMSTPSTPSDQNSNDDDETPMALDDVVLANQEQWQPKNEPLEVESACKNEISDTPPPPPPPSAGGETVFDPKRVKRILANRQSAQRSRVRKLQYISELERSVSTLQTEVSALSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHHEALRKEIERLRQIYEHQMKMEKSVNNTHNCLHSSSQALGCTDKDELLC 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2809 298 Coils Coil 250 270 - -
Sto4g2809 298 SMART brlzneu 167 231 IPR004827 GO:0003700|GO:0006355
Sto4g2809 298 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 174 189 IPR004827 GO:0003700|GO:0006355
Sto4g2809 298 MobiDBLite consensus disorder prediction 93 115 - -
Sto4g2809 298 SUPERFAMILY Leucine zipper domain 171 225 IPR046347 GO:0003700|GO:0006355
Sto4g2809 298 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 169 221 IPR004827 GO:0003700|GO:0006355
Sto4g2809 298 PANTHER BASIC LEUCINE ZIPPER 34 15 280 - -
Sto4g2809 298 MobiDBLite consensus disorder prediction 1 21 - -
Sto4g2809 298 PANTHER BASIC LEUCINE ZIPPER 2 15 280 - -
Sto4g2809 298 MobiDBLite consensus disorder prediction 147 169 - -
Sto4g2809 298 Gene3D - 170 241 - -
Sto4g2809 298 MobiDBLite consensus disorder prediction 93 119 - -
Sto4g2809 298 CDD bZIP_plant_RF2 172 222 IPR044759 GO:0003700|GO:0006355
Sto4g2809 298 Pfam bZIP transcription factor 171 216 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2809 Sto-Chr4 28944169 28945917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2809 16 249 bZIP Transcription Factor Family AT3G58120 57.540 2.54e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto4g2809 bZIP_1 6.9e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2809 - - cit:102614147 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2809 4 28944169 28945917 Sto4g2809 4 28944169 28945917 ECH