Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2806 ATGGCCATGAGAGGAGAGATCGTGGAGGTGGAAGGAGGGCACATTGTGCGATCCACGGGAAGGAAAGACCGTCATAGCAAGGTGTGTACGGCCAAGGGACCTAGAGATCGGAGAGTGCGTCTCTCTGCTCACACCGCCATTCAATTCTACGACGTCCAGGACCGTCTCGGCTACGACCGTCCCAGCAAAGCCGTCGATTGGCTCATCAATAAGGCCAAAGCCGCCATTGACGACCTCGCCAAGCTTCCCGCGTGGGATCCGAATACCTTCAACGACAAGAACCAGAGCGAGACCGCCATCGGACTCCACCATCCTGCGGCGGTGGATGATTCCGGTGGTGGTAGGATTGTGCAGCAATTGGGGGAGAACCAGAACGGCGGCGGCGGGTCGGGTTTTCTTCCGCTGGATAGCAACATTGCGGATAGCATCAAGTGTTTCTTCCCGGTGGGGTTCGATGAGGCTTCTTACTCAGAGGAACATGGCCGATTCAATAGAATGGTTGCTTGGAATGCTGATGATCATGATACTGGTAATGGCGGCAACGACGGTGCCGGCGGCGGAGACCCAACAATCGCCGCCGCCACAACTGATAACTACCATCATCACTATCTTGCACCGACATTCCTTCACCACCACTACCAATCAGCTATCTCCGGCGGCTTCTCCGGCTTCCGCATTCCAGCACGAATCCAGGGTGAAGAGGAGCACGACGGCGTTTCCGACAAGCCGTCCTCTGCTTCCTCTGATTCTCACCATTGA 759 0.5626 MAMRGEIVEVEGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLINKAKAAIDDLAKLPAWDPNTFNDKNQSETAIGLHHPAAVDDSGGGRIVQQLGENQNGGGGSGFLPLDSNIADSIKCFFPVGFDEASYSEEHGRFNRMVAWNADDHDTGNGGNDGAGGGDPTIAAATTDNYHHHYLAPTFLHHHYQSAISGGFSGFRIPARIQGEEEHDGVSDKPSSASSDSHH 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2806 252 MobiDBLite consensus disorder prediction 231 252 - -
Sto4g2806 252 Pfam TCP family transcription factor 20 96 IPR017887 -
Sto4g2806 252 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 4 97 IPR005333 GO:0003700
Sto4g2806 252 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 188 252 IPR005333 GO:0003700
Sto4g2806 252 ProSiteProfiles TCP domain profile. 21 79 IPR017887 -
Sto4g2806 252 PANTHER TRANSCRIPTION FACTOR TCP4 188 252 - -
Sto4g2806 252 PANTHER TRANSCRIPTION FACTOR TCP4 4 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2806 Sto-Chr4 28911671 28912807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2806 216 252 TCP Transcription Factor Family AT1G53230 72.973 1.53e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sto4g2806 TCP 7.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2806 - - gmx:100802063 185.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0200 7 1470155 1471468 Sto4g2806 4 28911671 28912807 ECH
Sto7g0480 7 3542715 3543626 Sto4g2806 4 28911671 28912807 ECH
Sto4g2806 4 28911671 28912807 Sto4g2806 4 28911671 28912807 ECH