Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2802 ATGATGAACAGTGGAGTTTGCAGTCTCCGAACGCCTTCTTGCCTGCGTCTTCCTCACCTCCCGGACAGACTTCTATTCCAACCACCTTCCCTCTCATTTACTTGCCGCCGGTGGCGGCGGCATTTGATCTCCGCCTTTGGAGCCGCCGAAGCGACCAAGAAGGAGGCCAAAGAGAAGGTTATTGTTATTTCTGGTCCCACTGGCGCCGGTAAAAGCCGGCTTGCATTACAGCTCGCGAAGCGGCTCAATGGCGAAATAGTCAGTGCGGACTCTATCCAGGTGTACCAAGGTCTTGATGTTGGATCCGCAAAGCCTTCCCCAAATGATAGAAAGTGTCTTATTAGCATTAATGTTATAGAACACCATGTATTAGTGGAACTTCAAATCTTGGGTAGTGCCAATTCGCAGGAGGTAACACATCATCTGGTTGACATATTGCATCCTTCTGAAGACTATTCAGTTGGACAGTTTTTTGAGGATGCAAGGCAAGCTACAAGACGTATTCTTGACAATGGCCGTGTTCCCATCGTTGTTGGGGGAACTGGATTGTATTTAAGATGGTTCATATATGGAAAGCCTGATGTCCCCAAAGCCTCTCCAGATATCACCTCTGAAGTATATTCAGAGTTAGGTGAACtgcagaaaaatgaagactggGATGCTGCTGTGCAGTTGCTGGTAAATGCCGGTGACCCAAAGGCCAAATTTTTAGCAGTTAATGATTGGTATCGATTACGGCGTAGCCTAGAAATTATCAAGTCTAGTGGATCACCTCCATCTTCTTTTCGGGTGCCATATGATTCTTTCAGGGAACAAGGTGATTCTAGTGATGCTGGTGGTTCTGAATCTTCTGATGCAATGGAAGAAACTAAGACCTCAGATTTGGACTATGAGTTTATATGTTTTTTCCTTTCTAGTCAAAGGCTTGATCTCTATAGATCAATTGACTATCGGTGTGAAGATATGCTGTTAGCTTTCTCTGTTGGATATGTAATTGGCTTTCTGCTGGGAAGGGATGGAATTCTGTCTGAGGCTGGATGGCTACTAAAGATGGGTCTTCATCCAAACTCCAATTCCGCAACTCGTGCAATTGGTTACAGACAAGTCCATCCTGTTCGTGATATTCGCAATATCTTTTTCTTGTGCTTTGGCCTAGCTTTGATTTCATTTGGCCATGCTATGGAATACTTACTTAGATGCAGACAACATGGGGGGCAGAGTTCAGCTGGAGAATTTTACGAGTTTTTATCCGAGTTTCAAAAAGCATCCAGGAATTTTGCGAAAAGACAATTGACTTGGTTTCGCAATGAACATATTTACCATTGGCTTGATGCTTCTAAACCTCTGGACACAGTTCTCAATTTCATTCATGACGCATATCATGATTGGAGTGGGACTCTCGTTGTGCCTGAACACCTTAGAATGCCTAGAGATATATCTAATCGCCGAGAAGCTACCCAACTTAAGTCATATCGCACCAAAAATAGGAATCTTGGAGTTCTTGTCAAGTCCAATTGA 1518 0.4348 MMNSGVCSLRTPSCLRLPHLPDRLLFQPPSLSFTCRRWRRHLISAFGAAEATKKEAKEKVIVISGPTGAGKSRLALQLAKRLNGEIVSADSIQVYQGLDVGSAKPSPNDRKCLISINVIEHHVLVELQILGSANSQEVTHHLVDILHPSEDYSVGQFFEDARQATRRILDNGRVPIVVGGTGLYLRWFIYGKPDVPKASPDITSEVYSELGELQKNEDWDAAVQLLVNAGDPKAKFLAVNDWYRLRRSLEIIKSSGSPPSSFRVPYDSFREQGDSSDAGGSESSDAMEETKTSDLDYEFICFFLSSQRLDLYRSIDYRCEDMLLAFSVGYVIGFLLGRDGILSEAGWLLKMGLHPNSNSATRAIGYRQVHPVRDIRNIFFLCFGLALISFGHAMEYLLRCRQHGGQSSAGEFYEFLSEFQKASRNFAKRQLTWFRNEHIYHWLDASKPLDTVLNFIHDAYHDWSGTLVVPEHLRMPRDISNRREATQLKSYRTKNRNLGVLVKSN 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2802 505 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 9 390 475 - -
Sto4g2802 505 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 9 50 368 - -
Sto4g2802 505 Pfam IPP transferase 93 437 - -
Sto4g2802 505 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 50 368 IPR039657 -
Sto4g2802 505 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 390 475 IPR039657 -
Sto4g2802 505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 207 IPR027417 -
Sto4g2802 505 Hamap tRNA dimethylallyltransferase [miaA]. 60 454 IPR018022 GO:0008033
Sto4g2802 505 Gene3D - 194 264 - -
Sto4g2802 505 Gene3D - 57 499 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2802 Sto-Chr4 28843260 28849008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2802 47 392 C2H2 Transcription Factor Family AT2G27760 24.576 3.44e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2802 K00791 - gmx:100808814 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2802 4 28843260 28849008 Sto4g2802 4 28843260 28849008 ECH